Name: Niastella hibisci THG-YS3.2.1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133253

Type strain:

Species: Niastella hibisci

Strain Designation: THG-YS3.2.1

Culture col. no.: KCTC 52084, CCTCC AB 2015356

NCBI tax ID(s): 1781166 (species)

Section

Niastella hibisci THG-YS3.2.1 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from rhizosphere soil of a; mugunghwa flower.

Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Chitinophagia*
	Order	*Chitinophagales*
	Family	*Chitinophagaceae*
	Genus	*Niastella*
	Species	**Niastella hibisci**
	Full Scientific Name (LPSN)	Niastella hibisci Yan et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #25095]	Gram stain	negative

[Ref.: #25095]	Cell length	2.0-2.5 µm

[Ref.: #25095]	Cell width	0.61-0.75 µm

[Ref.: #25095]	Cell shape	rod-shaped

[Ref.: #25095]	Motility	no

[Ref.: #25095]

Colony color

yellow

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #25095]			growth	10-40 °C
[Ref.: #25095]			optimum	28 °C

[Ref.: #25095]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #25095]			optimum	7
[Ref.: #25095]			growth	6.0-8.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #25095]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #25095]		NaCl		growth	0-1.0	%
[Ref.: #25095]		NaCl		optimum	1	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #25095]	2-dehydro-D-gluconate ChEBI	-	carbon source
[Ref.: #25095]	3-hydroxybenzoate ChEBI	-	carbon source
[Ref.: #25095]	3-hydroxybutyrate ChEBI	+	carbon source
[Ref.: #25095]	3-hydroxybutyrate ChEBI	+	assimilation
[Ref.: #25095]	4-hydroxybenzoate ChEBI	-	carbon source
[Ref.: #25095]	5-dehydro-D-gluconate ChEBI	-	carbon source
[Ref.: #25095]	adipate ChEBI	-	assimilation
[Ref.: #25095]	butyrate ChEBI	-	assimilation
[Ref.: #25095]	butyrate ChEBI	-	carbon source
[Ref.: #25095]	casein	-	hydrolysis
[Ref.: #25095]	cellulose ChEBI	+	hydrolysis
[Ref.: #25095]	chitin ChEBI	-	hydrolysis
[Ref.: #25095]	citrate ChEBI	-	assimilation
[Ref.: #25095]	D-glucose ChEBI	+	hydrolysis
[Ref.: #25095]	D-glucose ChEBI	+	assimilation
[Ref.: #25095]	D-mannitol ChEBI	-	assimilation
[Ref.: #25095]	D-mannitol ChEBI	+	carbon source
[Ref.: #25095]	D-mannitol ChEBI	+	assimilation
[Ref.: #25095]	D-mannose ChEBI	-	assimilation
[Ref.: #25095]	D-ribose ChEBI	-	carbon source
[Ref.: #25095]	D-sorbitol ChEBI	-	carbon source
[Ref.: #25095]	dna ChEBI	-	hydrolysis
[Ref.: #25095]	esculin ChEBI	+	hydrolysis
[Ref.: #25095]	gelatin ChEBI	+	hydrolysis
[Ref.: #25095]	gluconate ChEBI	-	assimilation
[Ref.: #25095]	glucose ChEBI	-	builds acid from
[Ref.: #25095]	glycogen ChEBI	-	carbon source
[Ref.: #25095]	itaconate ChEBI	-	carbon source
[Ref.: #25095]	L-alanine ChEBI	-	carbon source
[Ref.: #25095]	L-arabinose ChEBI	-	assimilation
[Ref.: #25095]	L-arabinose ChEBI	-	carbon source
[Ref.: #25095]	L-fucose ChEBI	-	carbon source
[Ref.: #25095]	L-histidine ChEBI	-	carbon source
[Ref.: #25095]	L-proline ChEBI	-	carbon source
[Ref.: #25095]	L-rhamnose ChEBI	-	carbon source
[Ref.: #25095]	L-serine ChEBI	+	carbon source
[Ref.: #25095]	L-serine ChEBI	+	assimilation
[Ref.: #25095]	L-tyrosine ChEBI	-	hydrolysis
[Ref.: #25095]	lactate ChEBI	-	carbon source
[Ref.: #25095]	malate ChEBI	-	assimilation
[Ref.: #25095]	maltose ChEBI	-	assimilation
[Ref.: #25095]	maltose ChEBI	-	carbon source
[Ref.: #25095]	melibiose ChEBI	-	carbon source
[Ref.: #25095]	myo-inositol ChEBI	-	carbon source
[Ref.: #25095]	N-acetylglucosamine ChEBI	-	assimilation
[Ref.: #25095]	N-acetylglucosamine ChEBI	-	carbon source
[Ref.: #25095]	nitrate ChEBI	-	reduction
[Ref.: #25095]	phenylacetate ChEBI	-	assimilation
[Ref.: #25095]	propionate ChEBI	-	carbon source
[Ref.: #25095]	salicin ChEBI	-	carbon source
[Ref.: #25095]	sodium acetate ChEBI	+	carbon source
[Ref.: #25095]	sodium acetate ChEBI	+	assimilation
[Ref.: #25095]	sodium citrate ChEBI	-	carbon source
[Ref.: #25095]	sodium malonate ChEBI	-	carbon source
[Ref.: #25095]	starch ChEBI	-	hydrolysis
[Ref.: #25095]	suberic acid ChEBI	-	carbon source
[Ref.: #25095]	sucrose ChEBI	-	carbon source
[Ref.: #25095]	tryptophan ChEBI	-	energy source
[Ref.: #25095]	tween 20 ChEBI	-	hydrolysis
[Ref.: #25095]	tween 80 ChEBI	-	hydrolysis
[Ref.: #25095]	valerate ChEBI	-	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #25095]		indole ChEBI	no

	Physiological tests	Metabolite	Indole test
[Ref.: #25095]		indole ChEBI	-

	Enzyme	Enzyme activity	EC number
[Ref.: #25095]	acid phosphatase	+	3.1.3.2
[Ref.: #25095]	alkaline phosphatase	+	3.1.3.1
[Ref.: #25095]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #25095]	alpha-fucosidase	+	3.2.1.51
[Ref.: #25095]	alpha-galactosidase	+	3.2.1.22
[Ref.: #25095]	alpha-glucuronidase	-	3.2.1.139
[Ref.: #25095]	alpha-mannosidase	-	3.2.1.24
[Ref.: #25095]	arginine dihydrolase	-	3.5.3.6
[Ref.: #25095]	beta-galactosidase	+	3.2.1.23
[Ref.: #25095]	beta-galactosidase	-	3.2.1.23
[Ref.: #25095]	beta-glucosidase	-	3.2.1.21
[Ref.: #25095]	beta-glucuronidase	-	3.2.1.31
[Ref.: #25095]	catalase	+	1.11.1.6
[Ref.: #25095]	cystine arylamidase	+	3.4.11.3
[Ref.: #25095]	cytochrome oxidase	-	1.9.3.1
[Ref.: #25095]	esterase (C 4)	+
[Ref.: #25095]	esterase lipase (C 8)	+
[Ref.: #25095]	leucine arylamidase	+	3.4.11.1
[Ref.: #25095]	lipase (C 14)	-
[Ref.: #25095]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #25095]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #25095]	trypsin	+	3.4.21.4
[Ref.: #25095]	tryptophan deaminase	-	4.1.99.1
[Ref.: #25095]	urease	-	3.5.1.5
[Ref.: #25095]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #25095]	Sample type/isolated from	rhizosphere soil of a mugunghwa flower
[Ref.: #25095]	Geographic location (country and/or sea, region)	Kyung Hee University, Yongin
[Ref.: #25095]	Country	Republic of Korea
[Ref.: #25095]	Country ISO 3 Code	KOR
[Ref.: #25095]	Continent	Asia
[Ref.: #25095]	Geographic location	37.5970°/127.0530°
[Ref.: #25095]	Isolation date	2015-10-05
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Shrub (Scrub)
#Host Body-Site	#Plant	#Rhizosphere

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #25095]	Niastella sp. THG-YS3.2.1 16S ribosomal RNA gene, partial sequence	KT962169	1479	GenBank	1781166 tax ID

[Ref.: #25095]

GC-content

45.3 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #25095]

Culture collection no.

KCTC 52084, CCTCC AB 2015356

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#25095

Z. F. L. Yan, P.,Wang, Y. S.,Gao, W.,Li, C. T.,Kook, M. C.,Yi, T. H.: Niastella hibisci sp. nov., isolated from rhizosphere soil of mugunghwa, the Korean national flower. IJSEM 66: 5218 - 5222 2016 ( DOI 10.1099/ijsem.0.001498 , PubMed 27638144 )

* These data were automatically processed and therefore are not curated

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