Prauserella muralis (DSM 45305, CCM 7635, CCUG 57426)

Name: Prauserella muralis (DSM 45305, CCM 7635, CCUG 57426)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 13322

Type strain

Strain Designation 05-Be-005

Culture col. no. DSM 45305 CCM 7635 CCUG 57426 NRRL B-24780 05-Be-005 1 more

NCBI tax ID(s) 588067

Special Collections DSMZ CCUG JCM Literature strains

Links

Prauserella muralis 05-Be-005 is an aerobe, spore-forming, mesophilic prokaryote that was isolated from wall colonized with moulds.

spore-forming Gram-positive aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 408313

JCM 17974,DSM 45305,CCUG 57426

@ref 20215

Last LPSN update 2025-12-16 09:50:03

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Pseudonocardiales

Family Pseudonocardiaceae

Genus Prauserella

Species Prauserella muralis

Full scientific name Prauserella muralis Schäfer et al. 2010

BacDive ID	Other strains from **Prauserella muralis** (3)	Type strain
103268	P. muralis STI10411(IMET), NCIB 9887, NRRL B-208
103269	P. muralis STI11318(IMET), NCIB 11287, VKM Ac-1135
103270	P. muralis STI10893(IMET), SG 1160

Morphology

Cell morphology

@ref	Gram stain	Cell width
29384	positive	1.3 µm
125439	positive

Colony morphology

61322

Incubation period3-7 days

Pigmentation

29384

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
16164	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)		Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
16164	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
16164	positive	growth	28	mesophilic
29384	positive	growth	25-30	mesophilic
61322	positive	growth	28	mesophilic
67770	positive	growth	28	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
29384	aerobe
61322	aerobe
125438	aerobe
125439	obligate aerobe

Spore formation

29384

Spore formationyes

Observation

67770

Observationquinones: MK-9(H₄)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
29384	22599 ChEBI	arabinose	+	carbon source
29384	35391 ChEBI	aspartate	+	carbon source
29384	17240 ChEBI	itaconate	+	carbon source
29384	24996 ChEBI	lactate	+	carbon source
29384	25017 ChEBI	leucine	+	carbon source
29384	17306 ChEBI	maltose	+	carbon source
29384	37684 ChEBI	mannose	+	carbon source
29384	506227 ChEBI	N-acetylglucosamine	+	carbon source
29384	18257 ChEBI	ornithine	+	carbon source
29384	18401 ChEBI	phenylacetate	+	carbon source
29384	17822 ChEBI	serine	+	carbon source
29384	30911 ChEBI	sorbitol	+	carbon source
29384	27082 ChEBI	trehalose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
29384	cytochrome oxidase	+	1.9.3.1

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	4-hydroxymandelate degradation	100	9 of 9
66794	octane oxidation	100	3 of 3
66794	aspartate and asparagine metabolism	100	9 of 9
66794	acetate fermentation	100	4 of 4
66794	palmitate biosynthesis	100	22 of 22
66794	ppGpp biosynthesis	100	4 of 4
66794	glycine betaine biosynthesis	100	5 of 5
66794	methylglyoxal degradation	100	5 of 5
66794	butanoate fermentation	100	4 of 4
66794	resorcinol degradation	100	2 of 2
66794	valine metabolism	100	9 of 9
66794	ketogluconate metabolism	100	8 of 8
66794	phenylmercury acetate degradation	100	2 of 2
66794	biotin biosynthesis	100	4 of 4
66794	L-lactaldehyde degradation	100	3 of 3
66794	propanol degradation	100	7 of 7
66794	ethanol fermentation	100	2 of 2
66794	threonine metabolism	100	10 of 10
66794	Entner Doudoroff pathway	100	10 of 10
66794	taurine degradation	100	1 of 1
66794	ceramide biosynthesis	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	denitrification	100	2 of 2
66794	coenzyme A metabolism	100	4 of 4
66794	formaldehyde oxidation	100	3 of 3
66794	cyanate degradation	100	3 of 3
66794	vitamin K metabolism	100	5 of 5
66794	ribulose monophosphate pathway	100	2 of 2
66794	reductive acetyl coenzyme A pathway	100	7 of 7
66794	glycolate and glyoxylate degradation	100	6 of 6
66794	phenylacetate degradation (aerobic)	100	5 of 5
66794	pentose phosphate pathway	100	11 of 11
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	molybdenum cofactor biosynthesis	100	9 of 9
66794	adipate degradation	100	2 of 2
66794	folate polyglutamylation	100	1 of 1
66794	cellulose degradation	100	5 of 5
66794	citric acid cycle	92.86	13 of 14
66794	leucine metabolism	92.31	12 of 13
66794	phenylalanine metabolism	92.31	12 of 13
66794	tryptophan metabolism	92.11	35 of 38
66794	degradation of sugar acids	92	23 of 25
66794	propionate fermentation	90	9 of 10
66794	alanine metabolism	89.66	26 of 29
66794	glutamate and glutamine metabolism	89.29	25 of 28
66794	CO2 fixation in Crenarchaeota	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	serine metabolism	88.89	8 of 9
66794	allantoin degradation	88.89	8 of 9
66794	peptidoglycan biosynthesis	86.67	13 of 15
66794	flavin biosynthesis	86.67	13 of 15
66794	purine metabolism	86.17	81 of 94
66794	vitamin B12 metabolism	85.29	29 of 34
66794	phenol degradation	85	17 of 20
66794	urea cycle	84.62	11 of 13
66794	pyrimidine metabolism	82.22	37 of 45
66794	proline metabolism	81.82	9 of 11
66794	degradation of sugar alcohols	81.25	13 of 16
66794	4-hydroxyphenylacetate degradation	80	8 of 10
66794	glycogen metabolism	80	4 of 5
66794	factor 420 biosynthesis	80	4 of 5
66794	3-chlorocatechol degradation	80	4 of 5
66794	myo-inositol biosynthesis	80	8 of 10
66794	ethylmalonyl-CoA pathway	80	4 of 5
66794	gallate degradation	80	4 of 5
66794	tyrosine metabolism	78.57	11 of 14
66794	photosynthesis	78.57	11 of 14
66794	tetrahydrofolate metabolism	78.57	11 of 14
66794	glutathione metabolism	78.57	11 of 14
66794	heme metabolism	78.57	11 of 14
66794	degradation of hexoses	77.78	14 of 18
66794	d-mannose degradation	77.78	7 of 9
66794	NAD metabolism	77.78	14 of 18
66794	vitamin B1 metabolism	76.92	10 of 13
66794	glycolysis	76.47	13 of 17
66794	histidine metabolism	75.86	22 of 29
66794	glycogen biosynthesis	75	3 of 4
66794	gluconeogenesis	75	6 of 8
66794	isoleucine metabolism	75	6 of 8
66794	CMP-KDO biosynthesis	75	3 of 4
66794	dTDPLrhamnose biosynthesis	75	6 of 8
66794	toluene degradation	75	3 of 4
66794	cyclohexanol degradation	75	3 of 4
66794	arginine metabolism	75	18 of 24
66794	sulfopterin metabolism	75	3 of 4
66794	degradation of pentoses	75	21 of 28
66794	lipid metabolism	74.19	23 of 31
66794	3-phenylpropionate degradation	73.33	11 of 15
66794	methionine metabolism	73.08	19 of 26
66794	vitamin B6 metabolism	72.73	8 of 11
66794	cholesterol biosynthesis	72.73	8 of 11
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	oxidative phosphorylation	71.43	65 of 91
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	androgen and estrogen metabolism	68.75	11 of 16
66794	methane metabolism	66.67	2 of 3
66794	degradation of aromatic, nitrogen containing compounds	66.67	8 of 12
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	acetoin degradation	66.67	2 of 3
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	non-pathway related	65.79	25 of 38
66794	carotenoid biosynthesis	63.64	14 of 22
66794	C4 and CAM-carbon fixation	62.5	5 of 8
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	lipoate biosynthesis	60	3 of 5
66794	bile acid biosynthesis, neutral pathway	58.82	10 of 17
66794	benzoyl-CoA degradation	57.14	4 of 7
66794	lysine metabolism	57.14	24 of 42
66794	cysteine metabolism	55.56	10 of 18
66794	metabolism of disaccharids	54.55	6 of 11
66794	phosphatidylethanolamine bioynthesis	53.85	7 of 13
66794	isoprenoid biosynthesis	53.85	14 of 26
66794	sulfate reduction	53.85	7 of 13
66794	carnitine metabolism	50	4 of 8
66794	lactate fermentation	50	2 of 4
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	coenzyme M biosynthesis	50	5 of 10
66794	quinate degradation	50	1 of 2
66794	glycine metabolism	50	5 of 10
66794	sphingosine metabolism	50	3 of 6
66794	kanosamine biosynthesis II	50	1 of 2
66794	pantothenate biosynthesis	50	3 of 6
66794	ascorbate metabolism	45.45	10 of 22
66794	nitrate assimilation	44.44	4 of 9
66794	lipid A biosynthesis	44.44	4 of 9
66794	polyamine pathway	43.48	10 of 23
66794	arachidonate biosynthesis	40	2 of 5
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	creatinine degradation	40	2 of 5
66794	hydrogen production	40	2 of 5
66794	D-cycloserine biosynthesis	40	2 of 5
66794	elloramycin biosynthesis	40	2 of 5
66794	arachidonic acid metabolism	38.89	7 of 18
66794	phenylpropanoid biosynthesis	38.46	5 of 13
66794	d-xylose degradation	36.36	4 of 11
66794	IAA biosynthesis	33.33	1 of 3
66794	chlorophyll metabolism	33.33	6 of 18
66794	enterobactin biosynthesis	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	sulfoquinovose degradation	33.33	1 of 3
66794	starch degradation	30	3 of 10
66794	aclacinomycin biosynthesis	28.57	2 of 7
66794	methanogenesis from CO2	25	3 of 12
66794	alginate biosynthesis	25	1 of 4
66794	ginsenoside metabolism	25	4 of 16
66794	vitamin E metabolism	25	1 of 4
66794	catecholamine biosynthesis	25	1 of 4

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Engineered	#Built environment
#Host	#Fungi

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
16164	wall colonized with moulds	Berlin	Germany	DEU	Europe
61322	Wall of an indoor environment colonized with mould	Berlin	Germany	DEU	Europe
67770	Wall of a house colonized with moulds	Berlin	Germany	DEU	Europe

Taxonmaps

69479

Global distribution of 16S sequence FM956091 (>99% sequence identity) for Prauserella muralis from Microbeatlas

Aquatic Samples	1
Soil Samples	26
Animal Samples	3
Plant Samples	2
Total Samples	32

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
16164	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM799396v1 assembly for Prauserella muralis DSM 45305	contig	GCA_007993965	588067.5	2818991319	588067	77.28
67770	ASM320228v1 assembly for Prauserella muralis DSM 45305	scaffold	GCA_003202285	588067.3	2865233180	588067	73.48

Genome browser: GCA_007993965

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
16164	Prauserella sp. 05-Be-005 partial 16S rRNA gene, type strain 05-Be-005T	FM956091	1412		588067
124043	Prauserella muralis strain CCM 7635 16S ribosomal RNA gene, partial sequence.	MT760160	1337		588067

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Prauserella muralis DSM 45305
NCBI: GCA_007993965

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	62.70	no
125439	motility	BacteriaNetⓘ	no	83.90	no
125439	gram_stain	BacteriaNetⓘ	positive	99.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.10	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Prauserella muralis strain DSM 45305
PATRIC: 588067.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.48	no
125438	anaerobic	anaerobicⓘ	no	97.11	no
125438	spore-forming	spore-formingⓘ	yes	81.30	yes
125438	aerobic	aerobicⓘ	yes	90.28	yes
125438	thermophilic	thermophileⓘ	no	95.86	no
125438	flagellated	motile2+ⓘ	no	86.00	no

Literature

Title	Authors	Journal	DOI	Year
Genomic Insights into the Distribution and Phylogeny of Glycopeptide Resistance Determinants within the Actinobacteria Phylum.	Andreo-Vidal A, Binda E, Fedorenko V, Marinelli F, Yushchuk O.	Antibiotics (Basel)	10.3390/antibiotics10121533	2021
Prauserella flavalba sp. nov., a novel species of the genus Prauserella, isolated from alkaline soil.	Li Q, Ruckert C, Li G, Huang P, Schneider O, Kalinowski J, Jiang Y, Zotchev SB, Jiang C	Int J Syst Evol Microbiol	10.1099/ijsem.0.003768	2020
Prauserella soli sp. nov., isolated from crude oil-contaminated soil.	Almutairi A	Int J Syst Evol Microbiol	10.1099/ijs.0.000378	2015
Prauserella muralis sp. nov., from the indoor environment.	Schafer J, Martin K, Kampfer P	Int J Syst Evol Microbiol	10.1099/ijs.0.012005-0	2009

References

#16164	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45305
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#29384	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25791 (see below)
#61322	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 57426
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Prauserella muralis (DSM 45305, CCM 7635, CCUG 57426)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Metabolite utilization

Enzymes

Pathway annotation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_007993965

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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