Rhizobium favelukesii (LPU83, CECT 9014, LMG 29160)

Name: Rhizobium favelukesii (LPU83, CECT 9014, LMG 29160)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133217

Type strain

Strain Designation LPU83

Culture col. no. LPU83 CECT 9014 LMG 29160

NCBI tax ID(s) 348824

Special Collections Literature strains

Links

Rhizobium favelukesii LPU83 is an aerobe, mesophilic, Gram-negative prokaryote that forms circular colonies and was isolated from alfalfa root nodule, plant-trap experiment inoculated with soil.

Gram-negative rod-shaped colony-forming aerobe mesophilic genome sequence

Name and taxonomic classification

SI-ID 272907

LMG 29160,CECT 9014

@ref 20215

Last LPSN update 2025-12-16 10:01:43

Domain Pseudomonadati

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Rhizobiaceae

Genus Rhizobium

Species Rhizobium favelukesii

Full scientific name Rhizobium favelukesii Torres Tejerizo et al. 2016

BacDive ID	Other strains from **Rhizobium favelukesii** (1)	Type strain
172802	R. favelukesii LPU83, CIP 110924 (type strain)

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
25035	negative	rod-shaped

Colony morphology

@ref	Colony color	Colony shape	Incubation period	Medium used
25035	pearly	circular	3 days	PY-agar

Culture and growth conditions

Culture medium

@ref	Name	Growth
25035	PY-agar
41898	MEDIUM 72- for trypto casein soja agar

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
25035	positive	optimum	28	mesophilic
25035	inconsistent	growth	37
41898	positive	growth	30	mesophilic

Culture pH

@ref	Ability	Type	PH
25035	positive	optimum	7
25035	positive	growth	4.5

Physiology and metabolism

Oxygen tolerance

25035

Oxygen toleranceaerobe

Spore formation

25035

Spore formationno

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
25035	16651 ChEBI	(S)-lactate	+	carbon source
25035	30089 ChEBI	acetate	+	carbon source
25035	17925 ChEBI	alpha-D-glucose	+	carbon source
25035	36219 ChEBI	alpha-lactose	+	carbon source
25035	73706 ChEBI	bromosuccinate	+	carbon source
25035	16947 ChEBI	citrate	+	carbon source
25035	15824 ChEBI	D-fructose	+	carbon source
25035	12936 ChEBI	D-galactose	+	carbon source
25035	8391 ChEBI	D-gluconate	+	carbon source
25035	17784 ChEBI	D-glucosaminic acid	+	carbon source
25035	15748 ChEBI	D-glucuronate	+	carbon source
25035	15588 ChEBI	D-malate	+	carbon source
25035	16899 ChEBI	D-mannitol	+	carbon source
25035	16024 ChEBI	D-mannose	+	carbon source
25035	27605 ChEBI	D-psicose	+	carbon source
25035	16523 ChEBI	D-serine	-	carbon source
25035	16551 ChEBI	D-trehalose	+	carbon source
25035	16000 ChEBI	ethanolamine	-	carbon source
25035	15740 ChEBI	formate	+	carbon source
25035	29806 ChEBI	fumarate	+	carbon source
25035	16813 ChEBI	galactitol	-	carbon source
25035	17754 ChEBI	glycerol	+	carbon source
25035	73784 ChEBI	glycyl-l-glutamate	+	carbon source
25035	16977 ChEBI	L-alanine	+	carbon source
25035	73786 ChEBI	L-alanylglycine	+	carbon source
25035	30849 ChEBI	L-arabinose	-	carbon source
25035	29991 ChEBI	L-aspartate	+	carbon source
25035	17464 ChEBI	L-galactonic acid gamma-lactone	+	carbon source
25035	18050 ChEBI	L-glutamine	+	carbon source
25035	15589 ChEBI	L-malate	-	carbon source
25035	17203 ChEBI	L-proline	+	carbon source
25035	16857 ChEBI	L-threonine	+	carbon source
25035	61993 ChEBI	maltotriose	+	carbon source
25035	75146 ChEBI	monomethyl succinate	+	carbon source
25035	17268 ChEBI	myo-inositol	+	carbon source
25035	50048 ChEBI	phenylethylamine	-	carbon source
25035	15361 ChEBI	pyruvate	+	carbon source
25035	30031 ChEBI	succinate	+	carbon source
25035	16704 ChEBI	uridine	-	carbon source

Antibiotic resistance

@ref	ChEBI	Metabolite	Is antibiotic	Is resistant	Resistance conc.
25035	27902	tetracycline			5 µg/mL

Enzymes

@ref	Value	Activity	Ec
25035	beta-galactosidase	+	3.2.1.23
25035	catalase	+	1.11.1.6
25035	cytochrome oxidase	+	1.9.3.1
25035	nitrate reductase	+	1.7.99.4
25035	urease	+	3.5.1.5

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root nodule

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
25035	alfalfa (Medicago sativa) root nodule, plant-trap experiment inoculated with soil	Castelar, Buenos Aires	Argentina	ARG	Middle and South America

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	IMG accession	NCBI tax ID	Score
66792	LPU83 assembly for Rhizobium favelukesii LPU83	chromosome	GCA_000577275	2740891995	348824	76.77

Genome browser: GCA_000577275

GC content

@ref	GC-content (mol%)	Method
25035	59.65	genome sequence analysis

Genome-based predictions

Literature

Title	Authors	Journal	DOI	Year
Exopolysaccharide Characterization of Rhizobium favelukesii LPU83 and Its Role in the Symbiosis With Alfalfa.	Castellani LG, Luchetti A, Nilsson JF, Perez-Gimenez J, Wegener C, Schluter A, Puhler A, Lagares A, Brom S, Pistorio M, Niehaus K, Torres Tejerizo GA	Front Plant Sci	10.3389/fpls.2021.642576	2021
ubiF is involved in acid stress tolerance and symbiotic competitiveness in Rhizobium favelukesii LPU83.	Martini MC, Vacca C, Torres Tejerizo GA, Draghi WO, Pistorio M, Lozano MJ, Lagares A, Del Papa MF	Braz J Microbiol	10.1007/s42770-022-00780-8	2022
Global transcriptome analysis of Rhizobium favelukesii LPU83 in response to acid stress.	Nilsson JF, Castellani LG, Draghi WO, Mogro EG, Wibberg D, Winkler A, Hansen LH, Schluter A, Puhler A, Kalinowski J, Torres Tejerizo GA, Pistorio M	FEMS Microbiol Ecol	10.1093/femsec/fiaa235	2020
Proteomic Analysis of Rhizobium favelukesii LPU83 in Response to Acid Stress.	Nilsson JF, Castellani LG, Draghi WO, Perez-Gimenez J, Torres Tejerizo GA, Pistorio M	J Proteome Res	10.1021/acs.jproteome.9b00275	2019
Insight into the structure, function and conjugative transfer of pLPU83a, an accessory plasmid of Rhizobium favelukesii LPU83.	Castellani LG, Nilsson JF, Wibberg D, Schluter A, Puhler A, Brom S, Pistorio M, Torres Tejerizo G	Plasmid	10.1016/j.plasmid.2019.03.004	2019
RcgA and RcgR, Two Novel Proteins Involved in the Conjugative Transfer of Rhizobial Plasmids.	Castellani LG, Luchetti A, Nilsson JF, Perez-Gimenez J, Struck B, Schluter A, Puhler A, Niehaus K, Romero D, Pistorio M, Torres Tejerizo G	mBio	10.1128/mbio.01949-22	2022
Rhizobium favelukesii sp. nov., isolated from the root nodules of alfalfa (Medicago sativa L).	Torres Tejerizo G, Rogel MA, Ormeno-Orrillo E, Althabegoiti MJ, Nilsson JF, Niehaus K, Schluter A, Puhler A, Del Papa MF, Lagares A, Martinez-Romero E, Pistorio M	Int J Syst Evol Microbiol	10.1099/ijsem.0.001373	2016

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#25035	G. R. Torres Tejerizo, M. A.,Ormeño-Orrillo, E.,Althabegoiti, M. J.,Nilsson, J. F.,Niehaus, K.,Schlüter, A.,Pühler, A.,Del Papa, M. F.,Lagares, A.,Martínez-Romero, E.,Pistorio, M.: Rhizobium favelukesii sp. nov., isolated from the root nodules of alfalfa (Medicago sativa L). IJSEM 66: 4451 - 4457 2016 ( DOI 10.1099/ijsem.0.001373 , PubMed 27499008 )
#41898	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Rhizobium favelukesii (LPU83, CECT 9014, LMG 29160)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Antibiotic resistance

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_000577275

GC content

Genome-based predictions

Literature

Literature

References

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