Name: Prauserella salsuginis DSM 45267
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 13321

Type strain:

Species: Prauserella salsuginis

Culture col. no.: DSM 45267, CCTCC AA 208054, YIM 90694, JCM 33235

Strain history: CCTCC AA 208054 <-- S.-K. Tang; Yunnan Inst. of Microbiol., Yunnan Univ., China; YIM 90694.

NCBI tax ID(s): 577680 (species)

Other strains from Prauserella salsuginis

P. salsuginis DSM 45264, CCTCC AA 208051, YIM ... (type strain)
P. salsuginis DSM 45265, CCTCC AA 208052, YIM ...

Section

Prauserella salsuginis DSM 45267 is an aerobe, spore-forming, mesophilic bacterium that was isolated from salt lake.

Gram-positive
spore-forming
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Prauserella*
	Species	**Prauserella salsuginis**
	Full Scientific Name (LPSN)	Prauserella salsuginis Li et al. 2009

	Synonym	Prauserella sediminis
	Synonym	Prauserella flava

Information on morphological and physiological properties Morphology

[Ref.: #29336]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #29336]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %93.354

[Ref.: #29336]

Pigment production

yes

Multimedia content

[Ref.: #16073]

Caption:

Medium 1159 37°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16073]

Culture medium

GYM STREPTOMYCES MEDIUM 10% NACL (DSMZ Medium 1159)

[Ref.: #16073]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #16073]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #16073]	growth	28-37 °C
[Ref.: #29336]	growth	15-45 °C
[Ref.: #29336]	optimum	32.5 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #16073]	Temperature range	mesophilic
[Ref.: #29336]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #29336]			optimum	7
[Ref.: #29336]			growth	06-09

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29336]

Oxygen tolerance

aerobe

[Ref.: #69481]	Ability of spore formation	yes Confidence in %97
[Ref.: #69480]	Ability of spore formation	yes Confidence in %99.069

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29336]		NaCl		growth	05-20	%
[Ref.: #29336]		NaCl		optimum	10	%

[Ref.: #29336]	Observation	aggregates in clumps
[Ref.: #67770]	Observation	quinones: MK-9(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29336]	alanine ChEBI	+	carbon source
[Ref.: #29336]	arginine ChEBI	+	carbon source
[Ref.: #29336]	D-tryptophan ChEBI	+	carbon source
[Ref.: #29336]	glucose ChEBI	+	carbon source
[Ref.: #29336]	histidine ChEBI	+	carbon source
[Ref.: #29336]	lactose ChEBI	+	carbon source
[Ref.: #29336]	phenylalanine ChEBI	+	carbon source
[Ref.: #29336]	proline ChEBI	+	carbon source
[Ref.: #29336]	rhamnose ChEBI	+	carbon source
[Ref.: #29336]	threonine ChEBI	+	carbon source

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #29336]		catalase	+	1.11.1.6
[Ref.: #29336]		gelatinase	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16073]	Sample type/isolated from	salt lake
[Ref.: #16073]	Geographic location (country and/or sea, region)	Xinjiang Province, Aiding Lake
[Ref.: #16073]	Country	China
[Ref.: #16073]	Country ISO 3 Code	CHN
[Ref.: #16073]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Water from Aiding Lake, a salt lake
[Ref.: #67770]	Geographic location (country and/or sea, region)	Xinjiang Province, north-west China
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Lake (large)
#Condition	#Saline	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence FJ444995 (>99% sequence identity) for Prauserella from Microbeatlas

Aquatic Samples	15
Soil Samples	41
Animal Samples	255
Plant Samples	11
Total Samples	322

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16073]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16073]	Prauserella sediminis strain YIM 90694 16S ribosomal RNA gene, partial sequence	FJ444995	1456	ENA	577680 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Prauserella sediminis DSM 45267	GCA_014195435	contig	GenBank	577680 tax ID	*
[Ref.: #66792]	Prauserella sediminis strain DSM 45267	577680.3	wgs	PATRIC	577680 tax ID	*
[Ref.: #66792]	Prauserella sediminis DSM 45267	2827231811	draft	JGI IMG/M	577680 tax ID	*

[Ref.: #16073]	GC-content	69.1 mol%	high performance liquid chromatography (HPLC)
[Ref.: #29336]	GC-content	69.1 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Prauserella sediminis strain DSM 45267 PATRIC: 577680.3
[Ref.: #69481]	spore-forming	yes	97	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Prauserella sediminis strain DSM 45267 PATRIC: 577680.3
[Ref.: #69480]	gram-positive	yes	88.331	no
[Ref.: #69480]	anaerobic	no	98.881	yes
[Ref.: #69480]	halophile	yes	85.324	yes
[Ref.: #69480]	spore-forming	yes	66.665	no
[Ref.: #69480]	glucose-util	yes	90.262	yes
[Ref.: #69480]	thermophile	no	95.364	no
[Ref.: #69480]	motile	no	91.328	yes
[Ref.: #69480]	flagellated	no	97.624	yes
[Ref.: #69480]	aerobic	yes	94.159	yes
[Ref.: #69480]	glucose-ferment	no	92.345	no

Availability in culture collections External links

[Ref.: #16073]

Culture collection no.

DSM 45267, CCTCC AA 208054, YIM 90694, JCM 33235

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Prauserella isguenensis sp. nov., a halophilic actinomycete isolated from desert soil.	Saker R, Bouras N, Meklat A, Zitouni A, Schumann P, Sproer C, Sabaou N, Klenk HP	Int J Syst Evol Microbiol	10.1099/ijs.0.000145	2015	*
Phylogeny	Prauserella salsuginis sp. nov., Prauserella flava sp. nov., Prauserella aidingensis sp. nov. and Prauserella sediminis sp. nov., isolated from a salt lake.	Li Y, Tang SK, Chen YG, Wu JY, Zhi XY, Zhang YQ, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.011122-0	2009	*

References

#16073

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45267

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29336

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25748 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#25748

IJSEM 2923 2009 ( DOI 10.1099/ijs.0.011122-0 , PubMed 19628605 )

* These data were automatically processed and therefore are not curated

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Prauserella sediminis strain DSM 45267

Prauserella sediminis strain DSM 45267

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