Name: Algoriphagus resistens NH1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133121

Type strain:

Species: Algoriphagus resistens

Strain Designation: NH1

Culture col. no.: MCCC 1H00140, KCTC 52228

Strain history: <- Zongjun Du, Shandong Univ., China

NCBI tax ID(s): 1750590 (species)

Section

Algoriphagus resistens NH1 is a facultative anaerobe, heterotroph, Gram-negative bacterium that forms circular colonies and was isolated from marine sediment.

colony-forming
Gram-negative
rod-shaped
facultative anaerobe
heterotroph
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Cytophagia*
	Order	*Cytophagales*
	Family	*Cyclobacteriaceae*
	Genus	*Algoriphagus*
	Species	**Algoriphagus resistens**
	Full Scientific Name (LPSN)	Algoriphagus resistens Han et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #25311]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative

[Ref.: #25311]	Cell length	0.8-2.0 µm

[Ref.: #25311]	Cell width	0.5-1.0 µm

[Ref.: #25311]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #67771]	Motility	no
[Ref.: #25311]	Motility	no

[Ref.: #25311]	Colony size	2 mm
[Ref.: #25311]	Colony color	pink
[Ref.: #25311]	Colony shape	circular
[Ref.: #25311]	Incubation period	3 days
[Ref.: #25311]	Cultivation medium used	MA

Information on culture and growth conditions Culture and growth conditions

[Ref.: #25311]

Culture medium

Marine agar (MA)

[Ref.: #25311]

Culture medium growth

		Temperature
[Ref.: #25311]	growth	13-37 °C
[Ref.: #25311]	optimum	28 °C
[Ref.: #67771]	growth	28 °C

[Ref.: #25311]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #25311]			optimum	6.5-7.0
[Ref.: #25311]			growth	5.5-8.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #25311]	Oxygen tolerance	facultative anaerobe
[Ref.: #67771]	Oxygen tolerance	facultative anaerobe

[Ref.: #25311]

Nutrition type

heterotroph

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #25311]		NaCl		growth	0.0-8.0	%(w/v)
[Ref.: #25311]		NaCl		optimum	3	%(w/v)

[Ref.: #67771]

Observation

quinones: MK-7

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #25311]	acetate ChEBI	+	oxidation
[Ref.: #25311]	acetoacetate ChEBI	+	oxidation
[Ref.: #25311]	agar ChEBI	-	hydrolysis
[Ref.: #25311]	alginate ChEBI	-	hydrolysis
[Ref.: #25311]	alpha-D-glucose ChEBI	+	oxidation
[Ref.: #25311]	alpha-lactose ChEBI	+	oxidation
[Ref.: #25311]	carboxymethylcellulose ChEBI	-	hydrolysis
[Ref.: #25311]	cellobiose ChEBI	+	builds acid from
[Ref.: #25311]	cellobiose ChEBI	+	oxidation
[Ref.: #25311]	D-fructose ChEBI	-	builds acid from
[Ref.: #25311]	D-fructose ChEBI	+	oxidation
[Ref.: #25311]	D-fucose ChEBI	+	oxidation
[Ref.: #25311]	D-galactose ChEBI	-	builds acid from
[Ref.: #25311]	D-galactose ChEBI	+	oxidation
[Ref.: #25311]	D-galacturonic acid ChEBI	+	oxidation
[Ref.: #25311]	D-glucose ChEBI	+	builds acid from
[Ref.: #25311]	D-glucose ChEBI	+	assimilation
[Ref.: #25311]	D-glucuronate ChEBI	+	oxidation
[Ref.: #25311]	D-mannitol ChEBI	-	assimilation
[Ref.: #25311]	D-mannose ChEBI	+	builds acid from
[Ref.: #25311]	D-mannose ChEBI	+	oxidation
[Ref.: #25311]	D-serine ChEBI	+	oxidation
[Ref.: #25311]	D-xylose ChEBI	+	builds acid from
[Ref.: #25311]	dextrin ChEBI	+	oxidation
[Ref.: #25311]	esculin ChEBI	+	builds acid from
[Ref.: #25311]	formate ChEBI	+	oxidation
[Ref.: #25311]	gentiobiose ChEBI	+	oxidation
[Ref.: #25311]	glucose ChEBI	+	fermentation
[Ref.: #25311]	glycerol ChEBI	-	assimilation
[Ref.: #25311]	L-arabinose ChEBI	-	builds acid from
[Ref.: #25311]	L-fucose ChEBI	+	oxidation
[Ref.: #25311]	L-galactonic acid gamma-lactone ChEBI	+	oxidation
[Ref.: #25311]	L-histidine ChEBI	+	oxidation
[Ref.: #25311]	L-rhamnose ChEBI	+	oxidation
[Ref.: #25311]	lactose ChEBI	+	assimilation
[Ref.: #25311]	maltose ChEBI	+	builds acid from
[Ref.: #25311]	maltose ChEBI	+	oxidation
[Ref.: #25311]	melibiose ChEBI	+	oxidation
[Ref.: #25311]	methyl alpha-D-mannoside ChEBI	+	builds acid from
[Ref.: #25311]	methyl alpha-D-mannoside ChEBI	+	oxidation
[Ref.: #25311]	N-acetylglucosamine ChEBI	+	oxidation
[Ref.: #25311]	nitrate ChEBI	+	reduction
[Ref.: #25311]	pectin ChEBI	+	oxidation
[Ref.: #25311]	raffinose ChEBI	+	oxidation
[Ref.: #25311]	salicin ChEBI	+	builds acid from
[Ref.: #25311]	salicin ChEBI	+	oxidation
[Ref.: #25311]	sorbitol ChEBI	-	assimilation
[Ref.: #25311]	stachyose ChEBI	+	oxidation
[Ref.: #25311]	starch ChEBI	-	hydrolysis
[Ref.: #25311]	sucrose ChEBI	+	oxidation
[Ref.: #25311]	trehalose ChEBI	-	builds acid from
[Ref.: #25311]	trehalose ChEBI	+	oxidation
[Ref.: #25311]	turanose ChEBI	+	oxidation
[Ref.: #25311]	tween 20 ChEBI	-	hydrolysis
[Ref.: #25311]	tween 40 ChEBI	-	hydrolysis
[Ref.: #25311]	tween 80 ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #25311]	acid phosphatase	+	3.1.3.2
[Ref.: #25311]	alkaline phosphatase	+	3.1.3.1
[Ref.: #25311]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #25311]	catalase	+	1.11.1.6
[Ref.: #25311]	cytochrome oxidase	-	1.9.3.1
[Ref.: #25311]	leucine arylamidase	+	3.4.11.1
[Ref.: #25311]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #25311]	trypsin	+	3.4.21.4
[Ref.: #25311]	valine arylamidase	+

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #25311]

Fatty acid	Percentage
C15:0 iso 2OH / C16:1ω7c	33.6
C15:0 iso	19.2
C16:1ω5c	7.1
C17:1ω9c	6.6
C16:1 iso H	4.5
C15:1 iso G	4.3
C16:0 iso	3.3
C17:0 iso 3OH	3
C15:0 iso 3OH	2.2
C16:0	1.8
C15:0 anteiso	1.8
C17:1ω6c	1.3
anteiso-C17:1 B	1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #25311]	Sample type/isolated from	marine sediment
[Ref.: #25311]	Geographic location (country and/or sea, region)	Weihai coast, Shandong Province, China
[Ref.: #25311]	Country	China
[Ref.: #25311]	Country ISO 3 Code	CHN
[Ref.: #25311]	Continent	Asia
[Ref.: #25311]	Geographic location	37.0000°/122.0000°

[Ref.: #67771]	Sample type/isolated from	From marine sediment
[Ref.: #67771]	Geographic location (country and/or sea, region)	the coastal area of Weihai, Shandong Province
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
[Ref.: #67771]	Geographic location	37.5178°/122.0220°
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KX852396 (>99% sequence identity) for Algoriphagus resistens subclade from Microbeatlas

Aquatic Samples	141
Soil Samples	95
Animal Samples	137
Plant Samples	62
Total Samples	435

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #25311]	16S rRNA gene sequences	KX852396	1484	ENA	1750590 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Algoriphagus resistens NH1	GCA_001442615	contig	GenBank	1750590 tax ID	*
[Ref.: #66792]	Algoriphagus resistens NH1	2724679001	draft	JGI IMG/M	1750590 tax ID	*

[Ref.: #67771]

GC-content

41.9 mol%

Availability in culture collections External links

[Ref.: #25311]

Culture collection no.

MCCC 1H00140, KCTC 52228

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Algoriphagus resistens sp. nov., isolated from marine sediment.	Han JR, Zhao JX, Wang ZJ, Chen GJ, Du ZJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.001805	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#25311

J. R. Z. Han, J. X.,Wang, Z. J.,Chen, G. J.,Du, Z. J.: Algoriphagus resistens sp. nov., isolated from marine sediment. IJSEM 67: 1275 - 1280 2017 ( DOI 10.1099/ijsem.0.001805 , PubMed 28109202 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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