Lentzea albida (DSM 44437, IFO 16102, NBRC 16102)

Name: Lentzea albida (DSM 44437, IFO 16102, NBRC 16102)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 13311

Type strain

Strain Designation NA 944235

Culture col. no. DSM 44437 IFO 16102 NBRC 16102 NRRL B-24073 NA 944235 3 more

NCBI tax ID(s) 65499

Special Collections DSMZ JCM KCTC

History DSMZ <- IFO <- H. Runmao, SIIA, Sichuan Industrial Inst. Antibiot.; NA 944235 JCM <-- IFO 16102 <-- R. Hu NA944235.

Links

Lentzea albida NA 944235 is a bacterium that was isolated from soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 50629

DSM 44437,IFO 16102,NRRL B-24073,JCM 10670,KCTC 19911,AS 4.1727,NBRC 16102,CGMCC 4.1727

@ref 20215

Last LPSN update 2026-05-29 08:28:00

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Pseudonocardiales

Family Pseudonocardiaceae

Genus Lentzea

Species Lentzea albida

Full scientific name Lentzea albida Labeda et al. 2001

Synonyms (1)

"Asiosporangium albidum"

BacDive ID	Other strains from **Lentzea albida** (1)	Type strain
136894	L. albida AM-2282, CIP 107745, NRRL 11184, JCM 9734, ...

Morphology

Cell morphology

@ref	Gram stain	Confidence	Motility
125439	positive	98.875
125439		90.821

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
11747	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
11747	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99.153

Observation

67770

Observationquinones: MK-9(H₄)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
68369	4853 ChEBI	esculin	+	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	+	hydrolysis	from API 20NE
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	+	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	+	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68369	gelatinase	+		from API 20NE
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
11747	-	+	-	-	-	+	-	-	+/-	+	+/-	+/-	+/-	+	-	+	-	+	+/-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
11747	-	-	-	-	-	+	+	+	+	+	+	+	+	+	+/-	-	+/-	+	+/-	-	not determinedn.d.

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
11747	soil	Province Jiangxi	China	CHN	Asia
67770	Soil	Jiangxi Province	China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB006176 (>99% sequence identity) for Lentzea from Microbeatlas

Aquatic Samples	22
Soil Samples	287
Animal Samples	13
Plant Samples	45
Total Samples	367

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
11747	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	IMG-taxon 2619619034 annotated assembly for Lentzea albida DSM 44437	scaffold	GCA_900111005	65499.4	2619619034	65499	70.21

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Lentzea albida gene for 16S ribosomal RNA, partial sequence	AB006176	1471		65499

GC content

@ref	GC-content (mol%)	Method
67770	70.2	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: IMG-taxon 2619619034 annotated assembly for Lentzea albida DSM 44437
NCBI: GCA_900111005

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.15	no
125439	motility	BacteriaNetⓘ	no	90.82	no
125439	gram_stain	BacteriaNetⓘ	positive	98.88	no
125439	spore_formation	BacteriaNetⓘ	yes	74.17	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lentzea albida strain DSM 44437
PATRIC: 65499.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	88.95	no
125438	anaerobic	anaerobicⓘ	no	97.81	no
125438	spore-forming	spore-formingⓘ	yes	83.96	no
125438	aerobic	aerobicⓘ	yes	83.91	no
125438	thermophilic	thermophileⓘ	no	97.00	yes
125438	flagellated	motile2+ⓘ	no	88.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Investigation of Vitamin D₂ and Vitamin D₃ Hydroxylation by Kutzneria albida.	Schmitz LM, Kinner A, Althoff K, Rosenthal K, Lutz S.	Chembiochem	10.1002/cbic.202100027	2021
Phylogeny	Revival of the genus Lentzea and proposal for Lechevalieria gen. nov.	Labeda DP, Hatano K, Kroppenstedt RM, Tamura T	Int J Syst Evol Microbiol	10.1099/00207713-51-3-1045	2001
Phylogeny	Lentzea isolaginshaensis sp. nov., an actinomycete isolated from desert soil.	Wang L, Li Y, Li Y	Antonie Van Leeuwenhoek	10.1007/s10482-018-1193-7	2018
Phylogeny	Lentzea cavernae sp. nov., an actinobacterium isolated from a karst cave sample, and emended description of the genus Lentzea.	Fang BZ, Han MX, Liu L, Zhang ZT, Liu WL, Shen JT, Wang Y, Zhang WQ, Wei DQ, Li WJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.001958	2017
Phylogeny	Lentzea jiangxiensis sp. nov., isolated from acidic soil.	Li X, Zhang L, Ding Y, Gao Y, Ruan J, Huang Y	Int J Syst Evol Microbiol	10.1099/ijs.0.033795-0	2011

References

#11747	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44437
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Lentzea albida (DSM 44437, IFO 16102, NBRC 16102)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API zym

API 20NE

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900111005

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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