Name: Legionella norrlandica LEGN
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132943

Type strain:

Species: Legionella norrlandica

Strain Designation: LEGN

Culture col. no.: DSM 105104, ATCC BAA-2678, CCUG 65936

Strain history: <- CCUG; CCUG 65936 <- S. Byfors, The Public Health Agency, Sweden; LEGN

NCBI tax ID(s): 1498499 (species)

SI-ID 403166

DSM 105104, CCUG 65936

Section

Legionella norrlandica LEGN is a microaerophile, mesophilic, Gram-negative bacterium that was isolated from biopurification system of a wood processing plant.

Gram-negative
mesophilic
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Legionellales*
	Family	*Legionellaceae*
	Genus	*Legionella*
	Species	**Legionella norrlandica**
	Full Scientific Name (LPSN)	Legionella norrlandica Rizzardi et al. 2015

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.985

[Ref.: #63260]

Incubation period

2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24731]

Culture medium

BCYE-AGAR (DSMZ Medium 585)

[Ref.: #24731]

Culture medium growth

[Ref.: #24731]

Culture medium link

Medium recipe at MediaDive

[Ref.: #24731]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24731]			growth	37 °C
[Ref.: #63260]			growth	37 °C

[Ref.: #24731]	Temperature range	mesophilic
[Ref.: #63260]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #63260]

Oxygen tolerance

microaerophile

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.974

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #63260]

Fatty acid	Percentage	ECL
C16:1 ω7c	24.8	15.819
C16:0 iso	23	15.626
C15:0 ANTEISO	14.1	14.711
C16:0	6.4	16
C14:0 ISO	6	13.618
C17:0 CYCLO	5.8	16.888
C14:0 ISO 3OH	5.6	15.117
C17:0 anteiso	5.1	16.722
C15:1 ω6c	3.6	14.856
Unidentified	1.7	16.319
C14:1 ω5c	1.6	13.899
C15:0 2OH	1.2	16.217
C14:0	1.1	14

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24731]	Sample type/isolated from	biopurification system of a wood processing plant
[Ref.: #24731]	Geographic location (country and/or sea, region)	Pitea
[Ref.: #24731]	Country	Sweden
[Ref.: #24731]	Country ISO 3 Code	SWE
[Ref.: #24731]	Continent	Europe

[Ref.: #63260]	Sample type/isolated from	Biopurification tank of wood processing plant
[Ref.: #63260]	Sampling date	2013-04-29
[Ref.: #63260]	Geographic location (country and/or sea, region)	Norrbotten
[Ref.: #63260]	Country	Sweden
[Ref.: #63260]	Country ISO 3 Code	SWE
[Ref.: #63260]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered	#Bioremediation	-
#Engineered	#Industrial	#Plant (Factory)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KJ796839 (>99% sequence identity) for Legionella from Microbeatlas

Aquatic Samples	158
Soil Samples	137
Animal Samples	39
Plant Samples	24
Total Samples	358

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24731]	Legionella norrlandica strain LEGN 16S ribosomal RNA gene, partial sequence	KJ796839	1474	ENA	1498499 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Legionella norrlandica LEGN	GCA_000770585	contig	GenBank	1498499 tax ID	*
[Ref.: #66792]	Legionella norrlandica LEGN	1498499.3	wgs	PATRIC	1498499 tax ID	*
[Ref.: #66792]	Legionella norrlandica LEGN	2627854194	draft	JGI IMG/M	1498499 tax ID	*

[Ref.: #24731]

GC-content

37.6 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Legionella norrlandica LEGN PATRIC: 1498499.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Legionella norrlandica LEGN PATRIC: 1498499.3
[Ref.: #69480]	motile	yes	78.44	no
[Ref.: #69480]	gram-positive	no	98.781	no
[Ref.: #69480]	anaerobic	no	97.572	no
[Ref.: #69480]	aerobic	no	94.059	no
[Ref.: #69480]	halophile	no	88.032	no
[Ref.: #69480]	spore-forming	no	94.542	no
[Ref.: #69480]	glucose-util	yes	66.883	no
[Ref.: #69480]	flagellated	no	75.68	no
[Ref.: #69480]	thermophile	no	97.282	no
[Ref.: #69480]	glucose-ferment	no	88.303	no

Availability in culture collections External links

[Ref.: #24731]

Culture collection no.

DSM 105104, ATCC BAA-2678, CCUG 65936

[Ref.: #91220]

SI-ID 403166

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Legionella norrlandica sp. nov., isolated from the biopurification systems of wood processing plants.	Rizzardi K, Winiecka-Krusnell J, Ramliden M, Alm E, Andersson S, Byfors S	Int J Syst Evol Microbiol	10.1099/ijs.0.068940-0	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24731

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105104

#63260 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 65936

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#91220

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403166.1 )

* These data were automatically processed and therefore are not curated

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