Name: Photobacterium panuliri LBS5
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 132933

Type strain:

Species: Photobacterium panuliri

Strain Designation: LBS5

Culture col. no.: DSM 27646, JCM 19199, LMG 27617

Strain history: S. K. Das LBS5.

NCBI tax ID(s): 1340529 (species)

SI-ID 388572

LMG 27617, JCM 19199

Special Collections

DSMZ
JCM

Section

Photobacterium panuliri LBS5 is a bacterium that was isolated from eggs on the pleopods of a female spiny lobster Panulirus penicillatus.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	"Vibrionales"
	Family	*Vibrionaceae*
	Genus	*Photobacterium*
	Species	**Photobacterium panuliri**
	Full Scientific Name (LPSN)	Photobacterium panuliri Deep et al. 2015

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #24721]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	28 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24721]	Sample type/isolated from	eggs on the pleopods of a female spiny lobster Panulirus penicillatus
[Ref.: #24721]	Host species	Panulirus penicillatus
[Ref.: #24721]	Geographic location (country and/or sea, region)	Andaman Sea (11°59'54''N, 92°58'32''E at a depth of 3 m)
[Ref.: #24721]	Country	India
[Ref.: #24721]	Country ISO 3 Code	IND
[Ref.: #24721]	Continent	Asia
[Ref.: #24721]	Geographic location	12.2333°/93.1667°

[Ref.: #67770]	Sample type/isolated from	Eggs of spiny lobster Panulirus penicillatus collected at a depth of 3.5 m in Andaman Sea
[Ref.: #67770]	Host species	Panulirus penicillatus
* marker position based on {}

Isolation sources categories

#Host	#Arthropoda	#Crustacea
#Host Body-Site	#Other	#Abdomen
#Host Body Product	#Urogenital tract	#Egg

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KC990827 (>99% sequence identity) for Photobacterium from Microbeatlas

Aquatic Samples	283
Soil Samples	33
Animal Samples	130
Plant Samples	7
Total Samples	453

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24721]	Photobacterium panuliri DSM:27646 16S ribosomal RNA gene, partial sequence	KC990827	1405	GenBank ENA	1340529 tax ID

[Ref.: #24721]

GC-content

50.52 mol%

fluorimetric

Availability in culture collections External links

[Ref.: #24721]

Culture collection no.

DSM 27646, JCM 19199, LMG 27617

[Ref.: #91211]

SI-ID 388572

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Cloning, Overexpression, and Characterization of Halostable, Solvent-Tolerant Novel beta-Endoglucanase from a Marine Bacterium Photobacterium panuliri LBS5(T) (DSM 27646(T)).	Deep K, Poddar A, Das SK	Appl Biochem Biotechnol	10.1007/s12010-015-1903-9	2015	*
Phylogeny	Photobacterium panuliri sp. nov., an alkalitolerant marine bacterium isolated from eggs of spiny lobster, Panulirus penicillatus from Andaman Sea.	Deep K, Poddar A, Das SK	Curr Microbiol	10.1007/s00284-014-0638-0	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24721

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27646

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#91211

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID388572.1 )

* These data were automatically processed and therefore are not curated

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