Acinetobacter puyangensis (DSM 105039, CFCC 10780, JCM 18011)

Name: Acinetobacter puyangensis (DSM 105039, CFCC 10780, JCM 18011)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 132918

Type strain

Strain Designation BQ4-1

Culture col. no. DSM 105039 CFCC 10780 JCM 18011 CCUG 69709 BQ4-1 1 more

NCBI tax ID(s) 1096779

Special Collections DSMZ CCUG JCM Literature strains CIP

History DSMZ <- JCM; JCM 18011 <- Y. Li, Chinese Academy of Forestry, Beijing, China; BQ4-1 JCM <-- Y. Li BQ4-1. CIP <- 2013, JCM <- 2011, Y. Li, Beijing Univ., Beijing, China: strain BQ4-1

Links

Acinetobacter puyangensis BQ4-1 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from canker of Populus x euramericana; healthy part of bark .

Gram-negative rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 413083

JCM 18011,CIP 110585

@ref 20215

Last LPSN update 2026-05-29 08:37:58

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Moraxellaceae

Genus Acinetobacter

Species Acinetobacter puyangensis

Full scientific name Acinetobacter puyangensis Li et al. 2013

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
30910	negative	0.9 µm	0.6 µm	rod-shaped
122079	negative			rod-shaped

Pigmentation

30910

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
36627	MEDIUM 566- Reasoner's 2A agar for Flavobacterium micromati		Distilled water make up to (1000.000 ml);R2A agar (18.200 g)
24706	CASO AGAR (MERCK 105458) (DSMZ Medium 220)	Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
122079	CIP Medium 566	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
24706	positive	growth	30
30910	positive	growth	10-41
30910	positive	optimum	30
36627	positive	growth	30
63659	positive	growth	30
67770	positive	growth	30

Culture pH

@ref	Ability	Type	PH	PH range
30910	positive	optimum	7
30910	positive	growth	05-11	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
30910	aerobe
63659	aerobe
125439	obligate aerobe	98.03

Spore formation

@ref	Spore formation	Confidence
125439		99.074

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30910	NaCl	positive	growth	0-3 %

Observation

30910

Observationaggregates in clumps

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30910	30089 ChEBI	acetate	+	carbon source
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
30910	16947 ChEBI	citrate	+	carbon source
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
30910	16236 ChEBI	ethanol	+	carbon source
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
30910	29987 ChEBI	glutamate	+	carbon source
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
30910	24996 ChEBI	lactate	+	carbon source
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
30910	18401 ChEBI	phenylacetate	+	carbon source
30910	28044 ChEBI	phenylalanine	+	carbon source
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
30910	catalase	+	1.11.1.6
68369	cytochrome oxidase	-	1.9.3.1	from API 20NE
68369	gelatinase	-		from API 20NE
68369	urease	-	3.5.1.5	from API 20NE

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
24706	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Tree
#Host Body-Site	#Plant	#Bark

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Sampling date	Isolation date
24706	canker of Populus x euramericana; healthy part of bark (1 cm from a lesion margin)	Populus x euramericana	Puyang City, Henan Province	China	CHN	Asia	35.8833	115.083 35.8833/115.083
63659	Populus bark		Puyang	China	CHN	Asia			2010
67770	Healthy part of symptomatic bark of Populus x euramericana canker (1 cm from a lesion margin) collected from Puyang City, during July 2010	Populus x euramericana	Henan Province	China	CHN	Asia
122079	Healthy part of Populus x euramericana canker bark, symptomatic bark, 1 cm from margin of lesion		Puyang City, Henan Province	China	CHN	Asia				2010-07-01

Interaction and safety

Risk assessment

@ref	Pathogenicity plant	Biosafety level	Biosafety level comment
24706	yes, in single cases	1	Risk group (German classification)
122079		1	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3954224v1 assembly for Acinetobacter puyangensis JCM 18011	scaffold	GCA_039542245	1096779	69.41
124043	ASM4265340v1 assembly for Acinetobacter puyangensis JCM 18011	scaffold	GCA_042653405	1096779	69.21

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
30910	Acinetobacter puyangensis strain BQ4-1 16S ribosomal RNA gene, partial sequence	JN664255	1460		1096779
24706	Acinetobacter puyangensis strain BQ4-1 16S ribosomal RNA, partial sequence	NR_109507	1460		1096779

GC content

@ref	GC-content (mol%)	Method
24706	42.5-43	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM3954224v1 assembly for Acinetobacter puyangensis JCM 18011
NCBI: GCA_039542245

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	negative	71.98	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.03	no
125439	motility	BacteriaNetⓘ	no	71.95	no
125439	spore_formation	BacteriaNetⓘ	no	99.07	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Acinetobacter puyangensis sp. nov., isolated from the healthy and diseased part of Populus xeuramericana canker bark.	Li Y, Piao CG, Ma YC, He W, Wang HM, Chang JP, Guo LM, Wang XZ, Xie SJ, Guo MW	Int J Syst Evol Microbiol	10.1099/ijs.0.047274-0	2013

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#24706	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105039
#27240	IJSEM 2963 2013 ( DOI 10.1099/ijs.0.047274-0 , PubMed 23396716 )
#30910	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27240
#36627	; Curators of the CIP;
#63659	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 69709
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#122079	Collection of Institut Pasteur ; Curators of the CIP; CIP 110585
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Acinetobacter puyangensis (DSM 105039, CFCC 10780, JCM 18011)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20NE

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_039542245

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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