Acetobacter oeni (DSM 17891, CECT 5830, LMG 21952)

Name: Acetobacter oeni (DSM 17891, CECT 5830, LMG 21952)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 132838

Type strain

Strain Designation B 13

Variant Isotype of BacDive ID 19

Culture col. no. DSM 17891 CECT 5830 LMG 21952 B 13

NCBI tax ID(s) 1307912 304077

Special Collections DSMZ

History <- E. Velázquez, Depart. Microbiol. y Gen., Univ. Salamanca, Spain; B 13 <- L. R. Silva, Depart. Microbiol. y Gen., Univ. Salamanca, Spain

Links

Acetobacter oeni B 13 is a bacterium that was isolated from Wine.

Bacteria

Name and taxonomic classification

SI-ID 100264

LMG 21952,CECT 5830,CIP 109171,DSM 23926,DSM 17891

@ref 20215

Last LPSN update 2026-02-09 11:31:48

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodospirillales

Family Acetobacteraceae

Genus Acetobacter

Species Acetobacter oeni

Full scientific name Acetobacter oeni Silva et al. 2006

BacDive ID	Other strains from **Acetobacter oeni** (1)	Type strain
19	A. oeni B13, DSM 23926, CECT 5830, LMG 21952, CIP ... (type strain)

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
24626	YED ACETOBACTER MEDIUM (DSMZ Medium 1424)	Medium recipe at MediaDive	Name: YED ACETOBACTER MEDIUM (DSMZ Medium 1424) Composition: Agar 20.0 g/l Glucose 7.0 g/l Yeast extract 4.0 g/l Distilled water
24626	YPM MEDIUM (DSMZ Medium 360)	Medium recipe at MediaDive	Name: YPM MEDIUM (DSMZ Medium 360) Composition: Mannitol 25.0 g/l Agar 12.0 g/l Yeast extract 5.0 g/l Peptone 3.0 g/l Distilled water
24626	GLUCONOBACTER OXYDANS MEDIUM (DSMZ Medium 105)	Medium recipe at MediaDive	Name: GLUCONOBACTER OXYDANS MEDIUM (DSMZ Medium 105) Composition: Glucose 100.0 g/l CaCO3 20.0 g/l Agar 15.0 g/l Yeast extract 10.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
24626	positive	growth	28

Physiology and metabolism

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	ethanol fermentation	100	2 of 2
66794	teichoic acid biosynthesis	100	1 of 1
66794	coenzyme A metabolism	100	4 of 4
66794	formaldehyde oxidation	100	3 of 3
66794	starch degradation	100	10 of 10
66794	butanoate fermentation	100	4 of 4
66794	biotin biosynthesis	100	4 of 4
66794	acetate fermentation	100	4 of 4
66794	adipate degradation	100	2 of 2
66794	threonine metabolism	100	10 of 10
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	methylglyoxal degradation	100	5 of 5
66794	ketogluconate metabolism	100	8 of 8
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	ceramide biosynthesis	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	valine metabolism	100	9 of 9
66794	folate polyglutamylation	100	1 of 1
66794	quinate degradation	100	2 of 2
66794	palmitate biosynthesis	95.45	21 of 22
66794	Entner Doudoroff pathway	90	9 of 10
66794	glutamate and glutamine metabolism	89.29	25 of 28
66794	aspartate and asparagine metabolism	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	allantoin degradation	88.89	8 of 9
66794	molybdenum cofactor biosynthesis	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	methionine metabolism	88.46	23 of 26
66794	vitamin B12 metabolism	88.24	30 of 34
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	tetrahydrofolate metabolism	85.71	12 of 14
66794	propanol degradation	85.71	6 of 7
66794	photosynthesis	85.71	12 of 14
66794	phenylalanine metabolism	84.62	11 of 13
66794	vitamin B1 metabolism	84.62	11 of 13
66794	NAD metabolism	83.33	15 of 18
66794	pentose phosphate pathway	81.82	9 of 11
66794	glycogen metabolism	80	4 of 5
66794	peptidoglycan biosynthesis	80	12 of 15
66794	alanine metabolism	79.31	23 of 29
66794	purine metabolism	78.72	74 of 94
66794	citric acid cycle	78.57	11 of 14
66794	serine metabolism	77.78	7 of 9
66794	d-mannose degradation	77.78	7 of 9
66794	CMP-KDO biosynthesis	75	3 of 4
66794	isoleucine metabolism	75	6 of 8
66794	gluconeogenesis	75	6 of 8
66794	sulfopterin metabolism	75	3 of 4
66794	glycogen biosynthesis	75	3 of 4
66794	histidine metabolism	72.41	21 of 29
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	reductive acetyl coenzyme A pathway	71.43	5 of 7
66794	heme metabolism	71.43	10 of 14
66794	pyrimidine metabolism	71.11	32 of 45
66794	arginine metabolism	70.83	17 of 24
66794	glycolysis	70.59	12 of 17
66794	leucine metabolism	69.23	9 of 13
66794	cyanate degradation	66.67	2 of 3
66794	flavin biosynthesis	66.67	10 of 15
66794	octane oxidation	66.67	2 of 3
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	CO2 fixation in Crenarchaeota	66.67	6 of 9
66794	acetoin degradation	66.67	2 of 3
66794	non-pathway related	65.79	25 of 38
66794	tryptophan metabolism	65.79	25 of 38
66794	vitamin B6 metabolism	63.64	7 of 11
66794	metabolism of disaccharids	63.64	7 of 11
66794	proline metabolism	63.64	7 of 11
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	degradation of sugar alcohols	62.5	10 of 16
66794	lipid metabolism	61.29	19 of 31
66794	cysteine metabolism	61.11	11 of 18
66794	oxidative phosphorylation	60.44	55 of 91
66794	cellulose degradation	60	3 of 5
66794	propionate fermentation	60	6 of 10
66794	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
66794	isoprenoid biosynthesis	57.69	15 of 26
66794	tyrosine metabolism	57.14	8 of 14
66794	glutathione metabolism	57.14	8 of 14
66794	degradation of pentoses	53.57	15 of 28
66794	degradation of sugar acids	52	13 of 25
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	cyclohexanol degradation	50	2 of 4
66794	cis-vaccenate biosynthesis	50	1 of 2
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	lysine metabolism	50	21 of 42
66794	glycine metabolism	50	5 of 10
66794	phosphatidylethanolamine bioynthesis	46.15	6 of 13
66794	phenylpropanoid biosynthesis	46.15	6 of 13
66794	sulfate reduction	46.15	6 of 13
66794	ascorbate metabolism	45.45	10 of 22
66794	cholesterol biosynthesis	45.45	5 of 11
66794	d-xylose degradation	45.45	5 of 11
66794	androgen and estrogen metabolism	43.75	7 of 16
66794	cardiolipin biosynthesis	42.86	3 of 7
66794	coenzyme M biosynthesis	40	4 of 10
66794	factor 420 biosynthesis	40	2 of 5
66794	4-hydroxyphenylacetate degradation	40	4 of 10
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	lipoate biosynthesis	40	2 of 5
66794	gallate degradation	40	2 of 5
66794	degradation of hexoses	38.89	7 of 18
66794	arachidonic acid metabolism	38.89	7 of 18
66794	carotenoid biosynthesis	36.36	8 of 22
66794	IAA biosynthesis	33.33	1 of 3
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	methane metabolism	33.33	1 of 3
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	3-phenylpropionate degradation	33.33	5 of 15
66794	sphingosine metabolism	33.33	2 of 6
66794	4-hydroxymandelate degradation	33.33	3 of 9
66794	enterobactin biosynthesis	33.33	1 of 3
66794	sulfoquinovose degradation	33.33	1 of 3
66794	nitrate assimilation	33.33	3 of 9
66794	urea cycle	30.77	4 of 13
66794	polyamine pathway	30.43	7 of 23
66794	benzoyl-CoA degradation	28.57	2 of 7
66794	catecholamine biosynthesis	25	1 of 4
66794	lactate fermentation	25	1 of 4
66794	phenol degradation	25	5 of 20
66794	carnitine metabolism	25	2 of 8
66794	toluene degradation	25	1 of 4

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Beverage
#Engineered	#Food production	#Fermented
#Host	#Plants	#Shrub (Scrub)
#Host Body-Site	#Plant	#Fruit (Seed)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
24626	Wine	Dao	Portugal	PRT	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
24626	1	Risk group (German classification)

Sequence information

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Development and Validation of a New Method for Detecting Acetic Bacteria in Wine.	Parra A, Ovejas A, Gonzalez-Arenzana L, Gutierrez AR, Lopez-Alfaro I.	Foods	10.3390/foods12203734	2023
	Molecular discrimination and identification of Acetobacter genus based on the partial heat shock protein 60 gene (hsp60) sequences	Huang C, Chang M, Huang L, Chua W.	Journal of the Science of Food and Agriculture.		2014
Phylogeny	Molecular discrimination and identification of Acetobacter genus based on the partial heat shock protein 60 gene (hsp60) sequences.	Huang CH, Chang MT, Huang L, Chua WS.	J Sci Food Agric	10.1002/jsfa.6231	2014
	Comprehensive deciphering prophages in genus Acetobacter on the ecology, genomic features, toxin-antitoxin system, and linkage with CRISPR-Cas system.	Qian C, Ma J, Liang J, Zhang L, Liang X.	Front Microbiol	10.3389/fmicb.2022.951030	2022
	Acetic Acid Bacteria in the Food Industry: Systematics, Characteristics and Applications.	Gomes RJ, Borges MF, Rosa MF, Castro-Gomez RJH, Spinosa WA.	Food Technol Biotechnol	10.17113/ftb.56.02.18.5593	2018
Phylogeny	Novel acetic acid bacteria from cider fermentations: Acetobacter conturbans sp. nov. and Acetobacter fallax sp. nov.	Sombolestani AS, Cleenwerck I, Cnockaert M, Borremans W, Wieme AD, De Vuyst L, Vandamme P.	Int J Syst Evol Microbiol	10.1099/ijsem.0.004511	2020
Phylogeny	Acetobacter sicerae sp. nov., isolated from cider and kefir, and identification of species of the genus Acetobacter by dnaK, groEL and rpoB sequence analysis.	Li L, Wieme A, Spitaels F, Balzarini T, Nunes OC, Manaia CM, Van Landschoot A, De Vuyst L, Cleenwerck I, Vandamme P.	Int J Syst Evol Microbiol	10.1099/ijs.0.058354-0	2014
Phylogeny	Acetobacter musti sp. nov., isolated from Bobal grape must.	Ferrer S, Manes-Lazaro R, Benavent-Gil Y, Yepez A, Pardo I	Int J Syst Evol Microbiol	10.1099/ijsem.0.000818	2015
Phylogeny	Acetobacter oeni sp. nov., isolated from spoiled red wine.	Silva LR, Cleenwerck I, Rivas R, Swings J, Trujillo ME, Willems A, Velazquez E	Int J Syst Evol Microbiol	10.1099/ijs.0.46000-0	2006

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#24626	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17891
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Acetobacter oeni (DSM 17891, CECT 5830, LMG 21952)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Pathway annotation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome-based predictions

Literature

Literature

References

BacDive

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