Zymomonas mobilis (DSM 12495, CU 1)

Name: Zymomonas mobilis (DSM 12495, CU 1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 132835

Type strain

Strain Designation CU 1

Culture col. no. DSM 12495 CU 1

NCBI tax ID(s) 542

Special Collections DSMZ

History <- C. Drainas, Univ. Ioannina, Dept. Chemistry, Greece; CU 1

Links

Zymomonas mobilis CU 1 is a bacterium of the family Zymomonadaceae.

genome sequence Bacteria

Name and taxonomic classification

SI-ID 402353

DSM 12495

@ref 20215

Last LPSN update 2026-02-09 11:31:48

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Sphingomonadales

Family Zymomonadaceae

Genus Zymomonas

Species Zymomonas mobilis

Full scientific name Zymomonas mobilis corrig. (Lindner 1928) Kluyver and van Niel 1936 (Approved Lists 1980)

Synonyms (2)

Zymomonas mobile
"Thermobacterium mobile"

BacDive ID	Other strains from **Zymomonas mobilis** (7)	Type strain
14289	Z. mobilis pZM01 to pZM06, DSM 424, ATCC 10988, NCIB ... (type strain)
14288	Z. mobilis DSM 473, ATCC 29501, NCIB 8227, CIP 102539, ...
100099	Z. mobilis STI09675(IMET), IFO 14523, INA 2240, IMET ...
131031	Z. mobilis DSM 14017, PROIMI A1
132834	Z. mobilis UVS 51, DSM 12494
132836	Z. mobilis DSM 12496, CCUG 17860, CIP 102538, JCM 20722, ...
132837	Z. mobilis CU 1 Rif 2, DSM 12497

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	97.048
125439	negative	99.3

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
24623	ZYMOMONAS MEDIUM (DSMZ Medium 10)		Medium recipe at MediaDive	Name: ZYMOMONAS MEDIUM (DSMZ Medium 10) Composition: Glucose 20.0 g/l Agar 15.0 g/l Yeast extract 10.0 g/l Bacto peptone 10.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
24623	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	96

Spore formation

@ref	Spore formation	Confidence
125438		92.352
125439		99.6

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
24623	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM671598v1 assembly for Zymomonas mobilis DSM 12495	contig	GCA_006715985	542.22	2811994958	542	77.04

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Zymomonas mobilis DSM 12495
NCBI: GCA_006715985

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.60	no
125439	motility	BacteriaNetⓘ	yes	55.70	no
125439	gram_stain	BacteriaNetⓘ	negative	99.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Zymomonas mobilis strain DSM 12495
PATRIC: 542.22

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.05	no
125438	anaerobic	anaerobicⓘ	no	57.40	no
125438	spore-forming	spore-formingⓘ	no	92.35	no
125438	aerobic	aerobicⓘ	no	73.99	no
125438	thermophilic	thermophileⓘ	no	93.13	no
125438	flagellated	motile2+ⓘ	yes	60.91	no

Literature

Title	Authors	Journal	DOI	Year
Zymomonas diversity and potential for biofuel production.	Felczak MM, Bowers RM, Woyke T, TerAvest MA.	Biotechnol Biofuels	10.1186/s13068-021-01958-2	2021

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#24623	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 12495
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Zymomonas mobilis (DSM 12495, CU 1)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_006715985

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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