Rhodobacter sp. (DSM 23280, Cr5-50)

Name: Rhodobacter sp. (DSM 23280, Cr5-50)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 132818

Type strain

Strain Designation Cr5-50

Culture col. no. DSM 23280 Cr5-50

NCBI tax ID(s) 1062

Special Collections DSMZ

History <- R. Margesin, Inst. Microbiology, Univ. Innsbruck, Austria; Cr5-50

Links

Cr5-50 is a bacterium that was isolated from glacier cryoconite.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 397995

DSM 23280

@ref 20215

Last LPSN update 2026-02-09 11:31:48

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodobacterales

Family Paracoccaceae

Genus Rhodobacter

Full scientific name Rhodobacter Imhoff et al. 1984

Synonyms (5)

Sinirhodobacter
Sedimentimonas
Stagnihabitans
Paenirhodobacter
Sinorhodobacter

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
24607	R2A MEDIUM (DSMZ Medium 830)		Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
24607	positive	growth	10

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Glacier
#Environmental	#Terrestrial	#Geologic
#Condition	#Psychrophilic (<10°C)	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
24607	glacier cryoconite	Zugspitze	Germany	DEU	Europe

Taxonmaps

69479

Global distribution of 16S sequence GU441680 (>99% sequence identity) for Cypionkella from Microbeatlas

Aquatic Samples	2894
Soil Samples	192
Animal Samples	115
Plant Samples	132
Total Samples	3333

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
24607	Rhodobacter sp. Cr5-50 16S ribosomal RNA gene, partial sequence	GU441680	1461		728007

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#24607	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23280
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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