Name: Mycobacterium vaccae Schering 260
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132766

Type strain:

Species: Mycobacterium vaccae

Strain Designation: Schering 260

Culture col. no.: DSM 43292, ATCC 15483, NCIB 9937, SN 920, JCM 6389, ATCC 23004, BCRC 17229, CCUG 21003, CECT 3019, CIP 105934, HAMBI 2276, IFO 14118, KCTC 19087, NBRC 14118, NCIMB 9937, NCTC 10916, TMC 1526

Strain history: M. Tsukamura 21007 <-- ATCC 15483 <-- R. Bonicke SN 920.

NCBI tax ID(s): 1223499 (strain), 1810 (species)

Other strains from Mycobacterium vaccae

M. vaccae Gerda 21, DSM 43229, SN 903
M. vaccae Angelika 59a, DSM 43514, IMET 10670, ...
M. vaccae Angelika 67, DSM 43515, IMET 10671, ...
M. vaccae Lore 90, DSM 43516, SN 918
M. vaccae STI07433(IMET), 4465, 80004, GdfM293, ...
M. vaccae STI07434(IMET), 7972, 80008, GdfM294, ...
M. vaccae CIP 105386
M. vaccae CIP 105695

Section

Mycobacterium vaccae Schering 260 is a mesophilic human pathogen that was isolated from cow's milk.

human pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Mycobacteriaceae*
	Genus	*Mycobacterium*
	Species	**Mycobacterium vaccae**
	Full Scientific Name (PNU)	Mycobacterium vaccae Bönicke and Juhasz 1964 (Approved Lists 1980)

Synonym

Mycolicibacterium vaccae

Information on morphological and physiological properties Morphology

[Ref.: #69480]

Gram stain

positive Confidence in %100

Multimedia content

[Ref.: #10934]

Caption:

Medium 645 37°C

[Ref.: #10934]

Intellectual property rights:

[Ref.: #10934]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #10934]

Culture medium

MIDDLEBROOK MEDIUM (DSMZ Medium 645)

[Ref.: #10934]

Culture medium growth

[Ref.: #10934]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #10934]

Culture medium composition

expand / minimize

[Ref.: #36254]

Culture medium

MEDIUM 55 - for Mycobacterium

[Ref.: #36254]

Culture medium growth

[Ref.: #10934]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #10934]

Culture medium growth

[Ref.: #10934]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #10934]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #10934]	growth	37 °C
[Ref.: #36254]	growth	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #10934]	Temperature range	mesophilic
[Ref.: #36254]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %99.955

[Ref.: #67770]

Observation

quinones: MK-9(H₂)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10934]	Sample type/isolated from	cow's milk

[Ref.: #67770]	Sample type/isolated from	Cow milk
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Bovinae (Cow, Cattle)
#Host Body Product	#Fluids	#Milk

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10934]	Pathogenicity (human)	yes
[Ref.: #10934]	Pathogenicity (animal)	yes
[Ref.: #10934]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Mycobacterium vaccae 16S ribosomal RNA gene, partial sequence	AF480591	1439	ENA	1810 tax ID
[Ref.: #67770]	M.vaccae 16S ribosomal RNA, part	X55601	1447	ENA	1810 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Mycolicibacterium vaccae NBRC 14118 = CIP 105934 NBRC 14118	GCA_001552715	contig	GenBank	1223499 tax ID
[Ref.: #67770]	Mycobacterium vaccae 95051, complete genome	CP011491		ENA	1354275 tax ID
[Ref.: #66792]	Mycobacterium vaccae 95051	1354275.3	complete	PATRIC	1354275 tax ID	*
[Ref.: #66792]	Mycobacterium vaccae NBRC 14118 = CIP 105934	1223499.3	wgs	PATRIC	1223499 tax ID	*
[Ref.: #66792]	Mycolicibacterium vaccae NBRC 14118	2731957598	draft	JGI IMG/M	1223499 tax ID	*
[Ref.: #66792]	Mycolicibacterium vaccae DSM 43292	GCA_025821205	contig	GenBank	1810 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mycobacterium vaccae 95051 PATRIC: 1354275.3
[Ref.: #69480]	anaerobic	no	99.234	no
[Ref.: #69480]	gram-positive	yes	100	yes
[Ref.: #69480]	spore-forming	no	99.955	yes
[Ref.: #69480]	thermophile	no	99.81	yes
[Ref.: #69480]	motile	no	89.574	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Mycobacterium vaccae 95051 PATRIC: 1354275.3
[Ref.: #69481]	spore-forming	no	77	no

Availability in culture collections External links

[Ref.: #10934]

Culture collection no.

DSM 43292, ATCC 15483, NCIB 9937, SN 920, JCM 6389, ATCC 23004, BCRC 17229, CCUG 21003, CECT 3019, CIP 105934, HAMBI 2276, IFO 14118, KCTC 19087, NBRC 14118, NCIMB 9937, NCTC 10916, TMC 1526

[Ref.: #20218]

Associated Passport(s) in StrainInfo

153102, 98436, 153103

Literature:

Topic	Title	Authors	Journal	DOI	Year
Stress	Comparing the effects of two different strains of mycobacteria, Mycobacterium vaccae NCTC 11659 and M. vaccae ATCC 15483, on stress-resilient behaviors and lipid-immune signaling in rats.	Loupy KM, Cler KE, Marquart BM, Yifru TW, D'Angelo HM, Arnold MR, Elsayed AI, Gebert MJ, Fierer N, Fonken LK, Frank MG, Zambrano CA, Maier SF, Lowry CA	Brain Behav Immun	10.1016/j.bbi.2020.09.030	2020	*
Phylogeny	Description of a novel species of fast growing mycobacterium: Mycobacterium kyogaense sp. nov., a scotochromogenic strain received as Mycobacterium vaccae.	Nouioui I, Brunet LR, Simpson D, Klenk HP, Goodfellow M	Int J Syst Evol Microbiol	10.1099/ijsem.0.003039	2018	*
Pathogenicity	Modulation of monocyte-tumour cell interactions by Mycobacterium vaccae.	Baran J, Baj-Krzyworzeka M, Weglarczyk K, Ruggiero I, Zembala M	Cancer Immunol Immunother	10.1007/s00262-004-0552-6	2004	*
Genetics	Comparative evaluation of Mycobacterium vaccae as a surrogate cloning host for use in the study of mycobacterial genetics.	Medeiros MA, Dellagostin OA, Armoa GRG, Degrave WM, de Mendonca-Lima L, Lopes MQ, Costa JF, Mcfadden J, McIntosh D	Microbiology (Reading)	10.1099/00221287-148-7-1999	2002	*

References

#10934

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43292

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#36254 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Mycobacterium vaccae in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Mycobacterium vaccae 95051

Mycobacterium vaccae 95051

Change proposal

Change proposal