Name: Haloechinothrix salitolerans DSM 45783
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 13275

Type strain:

Species: Haloechinothrix salitolerans

Culture col. no.: DSM 45783, CCTCC AB 208326, JCM 15899, TRM F103

Strain history: T.-W. Guan; Tarim Univ., China; TRM F103.

NCBI tax ID(s): 926830 (species)

SI-ID 398558

DSM 45783

Section

Haloechinothrix salitolerans DSM 45783 is an aerobe, mesophilic, Gram-positive bacterium that was isolated from hypersaline habitat of the Tarim basin.

Gram-positive
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Haloechinothrix*
	Species	**Haloechinothrix salitolerans**
	Full Scientific Name (LPSN)	Haloechinothrix salitolerans (Guan et al. 2012) Nouioui et al. 2018

Synonym

Amycolatopsis salitolerans

Information on morphological and physiological properties Morphology

[Ref.: #30153]	Gram stain	positive

[Ref.: #30153]	Motility	no

[Ref.: #30153]

Pigment production

Information on culture and growth conditions Culture and growth conditions

[Ref.: #18193]

Culture medium

ISP2 MEDIUM (DSMZ Medium 987)

[Ref.: #18193]

Culture medium growth

[Ref.: #18193]

Culture medium link

Medium recipe at MediaDive

[Ref.: #18193]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #18193]	growth	37 °C
[Ref.: #30153]	growth	25-45 °C
[Ref.: #30153]	optimum	37 °C
[Ref.: #67770]	growth	37 °C

[Ref.: #18193]	Temperature range	mesophilic
[Ref.: #30153]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30153]			optimum	7
[Ref.: #30153]			growth	5.0-8.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30153]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30153]		NaCl		growth	0-13	%
[Ref.: #30153]		NaCl		optimum	5	%

[Ref.: #67770]

Observation

quinones: MK-8(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30153]	esculin ChEBI	+	hydrolysis
[Ref.: #30153]	galactose ChEBI	+	carbon source
[Ref.: #30153]	glycerol ChEBI	+	carbon source
[Ref.: #30153]	maltose ChEBI	+	carbon source
[Ref.: #30153]	nitrate ChEBI	+	reduction
[Ref.: #30153]	rhamnose ChEBI	+	carbon source
[Ref.: #30153]	sorbitol ChEBI	+	carbon source
[Ref.: #30153]	tween 20 ChEBI	+	carbon source
[Ref.: #30153]	tween 40 ChEBI	+	carbon source
[Ref.: #30153]	tween 60 ChEBI	+	carbon source

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #30153]		catalase	+	1.11.1.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #18193]	Sample type/isolated from	hypersaline habitat of the Tarim basin
[Ref.: #18193]	Country	China
[Ref.: #18193]	Country ISO 3 Code	CHN
[Ref.: #18193]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Hypersaline habitat of the Tarim basin
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	-
#Condition	#Saline	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18193]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #18193]	Amycolatopsis salitolerans strain TRM F103 16S ribosomal RNA gene, partial sequence	HQ436534	1418	ENA	926830 tax ID

[Ref.: #18193]	GC-content	66.4 mol%	high performance liquid chromatography (HPLC)
[Ref.: #30153]	GC-content	66.4 mol%

Availability in culture collections External links

[Ref.: #18193]

Culture collection no.

DSM 45783, CCTCC AB 208326, JCM 15899, TRM F103

[Ref.: #82479]

SI-ID 398558

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Amycolatopsis salitolerans sp. nov., a filamentous actinomycete isolated from a hypersaline habitat.	Guan TW, Xia ZF, Tang SK, Wu N, Chen ZJ, Huang Y, Ruan JS, Li WJ, Zhang LL	Int J Syst Evol Microbiol	10.1099/ijs.0.030031-0	2011	*

References

#18193

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45783

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30153

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26504 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#82479

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398558.1 )

#26504

IJSEM 23 2012 ( DOI 10.1099/ijs.0.030031-0 , PubMed 21317279 )

* These data were automatically processed and therefore are not curated

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