Blastococcus colisei | Type strain | DSM 46837, CECT 8823, BMG 822 | BacDiveID:132717

Strain identifier

BacDive ID: 132717

Type strain:

Species: Blastococcus colisei

Culture col. no.: DSM 46837, CECT 8823, BMG 822

Strain history: <- M. Gtari, Tunisia; BMG 822 <- K. Hezbri, Tunisia

NCBI tax ID(s): 1564162 (species)

SI-ID 396820

DSM 46837

Section

Blastococcus colisei DSM 46837 is a mesophilic bacterium that was isolated from interior of a limestone rock from a archaeological amphitheatre.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Geodermatophilales*
	Family	*Geodermatophilaceae*
	Genus	*Blastococcus*
	Species	**Blastococcus colisei**
	Full Scientific Name (LPSN)	Blastococcus colisei Hezbri et al. 2017

Information on morphological and physiological properties Morphology

Multimedia content

Caption:

Medium 65 28°C

Intellectual property rights:

© Leibniz-Institut DSMZ

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Information on culture and growth conditions Culture and growth conditions

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

Culture medium growth

Culture medium link

Medium recipe at MediaDive

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24507]			growth	28 °C

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24507]	Sample type/isolated from	interior of a limestone rock from a archaeological amphitheatre
[Ref.: #24507]	Geographic location (country and/or sea, region)	El Jem, amphitheater (Coliseum Thysdrus)
[Ref.: #24507]	Country	Tunisia
[Ref.: #24507]	Country ISO 3 Code	TUN
[Ref.: #24507]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Geologic

What are isolation sources categories?

Global distribution of 16S sequence LN626273 (>99% sequence identity) for Blastococcus from Microbeatlas

Aquatic Samples	73
Soil Samples	1202
Animal Samples	120
Plant Samples	508
Total Samples	1903

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

Biosafety level

1

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24507]	Blastococcus colisei partial 16S rRNA gene, strain BMG 822	LN626273	1454	ENA	1564162 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Blastococcus colisei DSM 46837	GCA_006717095	contig	GenBank	1564162 tax ID	*
[Ref.: #66792]	Blastococcus colisei strain DSM 46837	1564162.3	wgs	PATRIC	1564162 tax ID	*
[Ref.: #66792]	Blastococcus coliseumis DSM 46837	2818991577	draft	JGI IMG/M	1564162 tax ID	*

GC-content

73.2 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Blastococcus colisei strain DSM 46837 PATRIC: 1564162.3
[Ref.: #69480]	motile	yes	69.483	no
[Ref.: #69480]	gram-positive	yes	89.076	no
[Ref.: #69480]	anaerobic	no	97.988	no
[Ref.: #69480]	aerobic	yes	91.998	no
[Ref.: #69480]	halophile	no	86.827	no
[Ref.: #69480]	spore-forming	no	74.888	no
[Ref.: #69480]	thermophile	no	95.944	yes
[Ref.: #69480]	glucose-util	yes	86.904	no
[Ref.: #69480]	flagellated	no	91.782	no
[Ref.: #69480]	glucose-ferment	no	90.847	no

Availability in culture collections External links

Culture collection no.

DSM 46837, CECT 8823, BMG 822

SI-ID 396820

*

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Blastococcus colisei sp. nov, isolated from an archaeological amphitheatre.	Hezbri K, Nouioui I, Rohde M, Schumann P, Gtari M, Klenk HP, Montero-Calasanz MD, Ghodhbane-Gtari F	Antonie Van Leeuwenhoek	10.1007/s10482-016-0804-4	2016	*
Phylogeny	Blastococcus tunisiensis sp. nov., isolated from limestone collected in Tunisia.	Louati M, Hezbri K, Montero-Calasanz MDC, Rohde M, Goker M, Ghodhbane-Gtari F, Klenk HP, Nouioui I, Gtari M	Int J Syst Evol Microbiol	10.1099/ijsem.0.005441	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24507

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46837

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66793

Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#91025

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID396820.1 )

* These data were automatically processed and therefore are not curated

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