Streptomyces ovatisporus (DSM 42103, CGMCC 4.7357, KCTC 29206)

Name: Streptomyces ovatisporus (DSM 42103, CGMCC 4.7357, KCTC 29206)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 132670

Type strain

Strain Designation S4702

Culture col. no. DSM 42103 CGMCC 4.7357 KCTC 29206 S4702

NCBI tax ID(s) 1128682

Special Collections DSMZ KCTC Literature strains

History <- N. Sahin, Ondokuz Mayis University, Samsun, Turkey; S4702 <- A. Veyisoglu

Links

Streptomyces ovatisporus S4702 is an aerobe, spore-forming, mesophilic prokaryote that was isolated from marine sediment.

spore-forming Gram-positive aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 398278

DSM 42103

@ref 20215

Last LPSN update 2026-02-09 11:31:46

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces ovatisporus

Full scientific name Streptomyces ovatisporus Veyisoglu et al. 2016

Morphology

Cell morphology

@ref	Gram stain	Motility
24980	positive

Multimedia

@ref:	24459
multimedia content:	DSM_42103.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_42103.jpg
caption:	Medium 65 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
24459	STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)	Medium recipe at MediaDive	Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 20.0 g/l Starch 10.0 g/l (NH4)2SO4 2.0 g/l CaCO3 2.0 g/l K2HPO4 1.0 g/l MgSO4 x 7 H2O 1.0 g/l NaCl 1.0 g/l FeSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l ZnSO4 x 7 H2O 0.001 g/l Distilled water
24459	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
24980	N-Z-Amine agar (DSMZ-medium 554)
24459	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
24459	positive	growth	28	mesophilic
24980	positive	optimum	28	mesophilic
24980	negative	growth	55
24980	negative	growth	50
24980	negative	growth	45
24980	negative	growth	40
24980	negative	growth	20
24980	negative	growth	10
24980	negative	growth	4
24980	positive	growth	28.0-37.0	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
24980	positive	optimum	7.2
24980	positive	growth	6.0-10.0	alkaliphile
24980		growth	4
24980		growth	5
24980		growth	11
24980		growth	12

Physiology and metabolism

Oxygen tolerance

24980

Oxygen toleranceaerobe

Spore formation

@ref	Spore description	Type of spore	Spore formation
24980	ovate,smooth-surfaced (0.5-0.6 0.9-1.0 µm)	spore

Halophily

@ref	Salt	Tested relation	Concentration
24980	NaCl	maximum	6 %(w/v)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
24980	16708 ChEBI	adenine	-	degradation
24980	15676 ChEBI	allantoin	+	hydrolysis
24980	18305 ChEBI	arbutin	+	hydrolysis
24980		casein	-	degradation
24980	17057 ChEBI	cellobiose	+	carbon source
24980	15356 ChEBI	cysteine	+	nitrogen source
24980	12936 ChEBI	D-galactose	+	carbon source
24980	16899 ChEBI	D-mannitol	+	carbon source
24980	16024 ChEBI	D-mannose	+	carbon source
24980	17924 ChEBI	D-sorbitol	-	carbon source
24980	23652 ChEBI	dextrin	+	carbon source
24980	4853 ChEBI	esculin	+	hydrolysis
24980	15428 ChEBI	glycine	+	nitrogen source
24980	16235 ChEBI	guanine	-	degradation
24980	24741 ChEBI	hydroxyproline	-	nitrogen source
24980	17368 ChEBI	hypoxanthine	-	degradation
24980	15443 ChEBI	inulin	+	carbon source
24980	24898 ChEBI	isoleucine	-	nitrogen source
24980	16977 ChEBI	L-alanine	-	nitrogen source
24980	30849 ChEBI	L-arabinose	-	carbon source
24980	16467 ChEBI	L-arginine	+	nitrogen source
24980	16643 ChEBI	L-methionine	-	nitrogen source
24980	17295 ChEBI	L-phenylalanine	-	nitrogen source
24980	17203 ChEBI	L-proline	-	nitrogen source
24980	62345 ChEBI	L-rhamnose	+	carbon source
24980	17115 ChEBI	L-serine	-	nitrogen source
24980	16857 ChEBI	L-threonine	+	nitrogen source
24980	17895 ChEBI	L-tyrosine	-	nitrogen source
24980	90608 ChEBI	L-valine 2-naphthylamide	-	nitrogen source
24980	17716 ChEBI	lactose	+	carbon source
24980	17306 ChEBI	maltose	+	carbon source
24980	6731 ChEBI	melezitose	+	carbon source
24980	17632 ChEBI	nitrate	-	reduction
24980	15963 ChEBI	ribitol	-	carbon source
24980	28017 ChEBI	starch	+	degradation
24980	17992 ChEBI	sucrose	-	carbon source
24980	17992 ChEBI	sucrose	+	carbon source
24980	53424 ChEBI	tween 20	+	degradation
24980	53423 ChEBI	tween 40	+	degradation
24980	16199 ChEBI	urea	-	hydrolysis
24980	15318 ChEBI	xanthine	-	degradation
24980	37166 ChEBI	xylan	-	degradation

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude	Enrichment culture	Enrichment culture composition	Enrichment culture duration	Enrichment culture temperature	Isolation procedure
24459	marine sediment	Samsun, Black Sea (41° 19.201' N and 036° 25.489 157' E at a depth of 42 m)	Turkey	TUR	Asia	41.32	36.4248 41.32/36.4248
24980								non-sporulating medium	per litre distilled water: 20 g casamino acids, 20 g soluble starch, 4 g yeast-extract, 15 g agar,(pH 7.2â??7.4) , supplemented with filter-sterilised rifampicin (5 Âµg ml-1) and nystatin (50 Âµg ml-1)	30 days	28	dilution-plating method

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
24459	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4265388v1 assembly for Streptomyces ovatisporus CGMCC 4.7357	scaffold	GCA_042653885	1128682	71.31

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
24459	Streptomyces ovatisporus strain S4702 16S ribosomal RNA gene, partial sequence	JN989306	1400		1128682

GC content

@ref	GC-content (mol%)	Method
24980	72.5	Thermal denaturation, fluorometry
24459	72.5	fluorimetric

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	A Novel 4H-Chromen-4-One Derivative from Marine Streptomyces ovatisporus S4702(T) as Potential Antibacterial and Anti-Cancer Agent.	Kurt-Kizildogan A, Akarsu N, Otur C, Kivrak A, Aslan-Ertas N, Arslan S, Mutlu D, Konus M, Yilmaz C, Cetin D, Topal T, Sahin N	Anticancer Agents Med Chem	10.2174/1871520621666210311085748	2022
Phylogeny	Streptomyces ovatisporus sp. nov., isolated from deep marine sediment.	Veyisoglu A, Cetin D, Inan Bektas K, Guven K, Sahin N	Int J Syst Evol Microbiol	10.1099/ijsem.0.001442	2016

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#24459	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 42103
#24980	A. C. Veyisoglu, Demet,Inan Bektas, Kadriye,Guven, Kiymet,Sahin, Nevzat: Streptomyces ovatisporus sp. nov., isolated from deep marine sediment. IJSEM 66: 4856 - 4863 2016 ( DOI 10.1099/ijsem.0.001442 , PubMed 27553490 )
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces ovatisporus (DSM 42103, CGMCC 4.7357, KCTC 29206)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_042653885

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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