Microbacterium faecale | Type strain | DSM 27232, CGMCC 1.15152, KCTC 39554, YIM 101168

Strain identifier

BacDive ID: 132660

Type strain:

Species: Microbacterium faecale

Culture col. no.: DSM 27232, CGMCC 1.15152, KCTC 39554, YIM 101168

Strain history: <- W.-J. Li <- X. Chen, Yunnan Institute of Microbiology, Yunnan University, Kunming, China; YIM 101168

Section

Name and taxonomic classification
Morphology
Culture and growth conditions
Physiology and metabolism
Isolation, sampling and environmental information
Safety information
Sequence information

External links

Microbacterium faecale DSM 27232 is an aerobe, gram-positive bacterium that was isolated from dove faeces, Columba livia.

gram-positive
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	23-11-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Actinobacteria
	Class	Actinobacteria
	Order	Micrococcales
	Family	Microbacteriaceae
	Genus	Microbacterium
	Species	Microbacterium faecale
	Full Scientific Name (PNU)	Microbacterium faecale Chen et al. 2016

Information on morphological and physiological propertiesMorphology

[Ref.: #24965]	Gram stain	positive
[Ref.: #24965]	Cell length	0.7 µm
[Ref.: #24965]	Cell width	0.5 µm
[Ref.: #24965]	Motility	no

[Ref.: #24965]	Gram stain	positive
[Ref.: #24965]	Cell length	0.7 µm
[Ref.: #24965]	Cell width	0.5 µm
[Ref.: #24965]	Cell shape	rod-shaped
[Ref.: #24965]	Motility	no

[Ref.: #24965]	Colony size	0.5-3.0 mm
[Ref.: #24965]	Colony color	yellow
[Ref.: #24965]	Cultivation medium used	ISP2

Information on culture and growth conditionsCulture and growth conditions

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Culture medium

ISP2

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Culture medium growth

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Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

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Culture medium growth

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Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #24449]			growth	28 ̊C
[Ref.: #24965]			growth	7-37 ̊C

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Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #24965]			growth	6.0-10.0

Information on physiology and metabolismPhysiology and metabolism

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Oxygen tolerance

aerobe

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Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #24965]		NaCl		growth	0-13	%(w/v)
[Ref.: #24965]		NaCl		growth	0-13.0	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #24965]	adipate ChEBI	-	assimilation
[Ref.: #24965]	amygdalin ChEBI	+	assimilation
[Ref.: #24965]	casein	-	hydrolysis
[Ref.: #24965]	cellulose ChEBI	-	hydrolysis
[Ref.: #24965]	citrate ChEBI	-	assimilation
[Ref.: #24965]	D-glucose ChEBI	+	assimilation
[Ref.: #24965]	D-mannitol ChEBI	+	assimilation
[Ref.: #24965]	D-mannose ChEBI	+	assimilation
[Ref.: #24965]	D-sorbitol ChEBI	-	assimilation
[Ref.: #24965]	decanoate ChEBI	-	assimilation
[Ref.: #24965]	esculin ChEBI	+	hydrolysis
[Ref.: #24965]	gelatin ChEBI	+	hydrolysis
[Ref.: #24965]	L-arabinose ChEBI	+	assimilation
[Ref.: #24965]	L-arginine ChEBI	-	hydrolysis
[Ref.: #24965]	L-lysine ChEBI	+	hydrolysis
[Ref.: #24965]	L-ornithine ChEBI	+	hydrolysis
[Ref.: #24965]	L-rhamnose ChEBI	+	assimilation
[Ref.: #24965]	malate ChEBI	-	assimilation
[Ref.: #24965]	maltose ChEBI	+	assimilation
[Ref.: #24965]	melibiose ChEBI	-	assimilation
[Ref.: #24965]	myo-inositol ChEBI	-	assimilation
[Ref.: #24965]	N-acetylglucosamine ChEBI	+	assimilation
[Ref.: #24965]	nitrate ChEBI	-	reduction
[Ref.: #24965]	phenylacetate ChEBI	-	assimilation
[Ref.: #24965]	potassium gluconate ChEBI	+	assimilation
[Ref.: #24965]	starch ChEBI	-	hydrolysis
[Ref.: #24965]	sucrose ChEBI	-	assimilation
[Ref.: #24965]	tryptophan ChEBI	-	energy source
[Ref.: #24965]	tween 20 ChEBI	-	hydrolysis
[Ref.: #24965]	tween 80 ChEBI	-	hydrolysis
[Ref.: #24965]	urea ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #24965]		acetoin ChEBI	yes
[Ref.: #24965]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Indole test
[Ref.: #24965]		acetoin ChEBI	+
[Ref.: #24965]		indole ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #24965]	acid phosphatase	+	3.1.3.2
[Ref.: #24965]	alkaline phosphatase	+	3.1.3.1
[Ref.: #24965]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #24965]	alpha-fucosidase	-	3.2.1.51
[Ref.: #24965]	alpha-galactosidase	+	3.2.1.22
[Ref.: #24965]	alpha-glucosidase	+	3.2.1.20
[Ref.: #24965]	alpha-mannosidase	-	3.2.1.24
[Ref.: #24965]	beta-galactosidase	+	3.2.1.23
[Ref.: #24965]	beta-glucosidase	+	3.2.1.21
[Ref.: #24965]	beta-glucuronidase	+	3.2.1.31
[Ref.: #24965]	catalase	+	1.11.1.6
[Ref.: #24965]	cystine arylamidase	+	3.4.11.3
[Ref.: #24965]	cytochrome oxidase	-	1.9.3.1
[Ref.: #24965]	esterase (C 4)	+
[Ref.: #24965]	esterase lipase (C 8)	+
[Ref.: #24965]	leucine arylamidase	+	3.4.11.1
[Ref.: #24965]	lipase (C 14)	-
[Ref.: #24965]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #24965]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #24965]	trypsin	-	3.4.21.4
[Ref.: #24965]	tryptophan deaminase	-	4.1.99.1
[Ref.: #24965]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #24449]	Sample type/isolated from	dove faeces, Columba livia
[Ref.: #24449]	Host species	Columba livia
[Ref.: #24449]	Geographic location (country and/or sea, region)	Yunnan Province, Yunnan Wild Animal Park
[Ref.: #24449]	Country	China
[Ref.: #24449]	Country ISO 3 Code	CHN
[Ref.: #24449]	Continent	Asia

[Ref.: #24965]	Enrichment culture duration	7 days
[Ref.: #24965]	Enrichment culture temperature	28 ̊C

Isolation sources categories

#Host	#Birds	-
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsSafety information

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Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassSequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24449]	Microbacterium faecale strain YIM 101168 16S ribosomal RNA gene, partial sequence	KT756666	1519	ENA	1804630 tax ID

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GC-content

69.7 mol%

high performance liquid chromatography (HPLC)

Availability in culture collectionsExternal links

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Culture collection no.

DSM 27232, CGMCC 1.15152, KCTC 39554, YIM 101168

References

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#24449

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27232

#24965

X. L. Chen, Gui-Ding,Li, Qin-Yuan,Xu, Fang-Ji,Jiang, Cheng-Lin,Han, Li,Huang, Xue-Shi,Jiang, Yi: Microbacterium faecale sp. nov., isolated from the faeces of Columba livia. IJSEM 66: 4445 - 4450 2016 ( DOI 10.1099/ijsem.0.001372 )

* These References are textmined

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