Name: Streptomyces camponoticapitis 2H-TWYE14
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132630

Type strain:

Species: Streptomyces camponoticapitis

Strain Designation: 2H-TWYE14

Culture col. no.: DSM 100523, CGMCC 4.7275

Strain history: <- C. Liu, Northeast Agricultural Univ., Harbin, China; 2H-TWYE14

NCBI tax ID(s): 1616125 (species)

SI-ID 396541

DSM 100523

Section

Streptomyces camponoticapitis 2H-TWYE14 is an aerobe, spore-forming, Gram-positive bacterium that has a greyish yellow pigmentation and was isolated from head of an ant .

Gram-positive
pigmented
spore-forming
spore-shaped
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces camponoticapitis**
	Full Scientific Name (LPSN)	Streptomyces camponoticapitis Li et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #24892]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #24892]	Cell shape	spore-shaped

[Ref.: #24892]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %92.579

[Ref.: #24892]	Pigment production	yes
[Ref.: #24892]	Pigmentation color	greyish yellow
[Ref.: #24892]	Pigment name	soluble Pigements

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

		Temperature
[Ref.: #24419]	growth	28 °C
[Ref.: #24892]	growth	10-37 °C
[Ref.: #24892]	optimum	28 °C

[Ref.: #24419]	Temperature range	mesophilic
[Ref.: #24892]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #24892]			optimum	7.0-8.0
[Ref.: #24892]			growth	6.0-10.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #24892]

Oxygen tolerance

aerobe

[Ref.: #69481]	Ability of spore formation	yes Confidence in %99
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #24892]		NaCl		maximum	1	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #24892]	creatine ChEBI	+	nitrogen source
[Ref.: #24892]	D-fructose ChEBI	-	carbon source
[Ref.: #24892]	D-galactose ChEBI	+	carbon source
[Ref.: #24892]	D-glucose ChEBI	+	carbon source
[Ref.: #24892]	D-mannitol ChEBI	+	carbon source
[Ref.: #24892]	D-ribose ChEBI	+	carbon source
[Ref.: #24892]	D-sorbitol ChEBI	-	carbon source
[Ref.: #24892]	D-xylose ChEBI	+	carbon source
[Ref.: #24892]	glycine ChEBI	-	nitrogen source
[Ref.: #24892]	L-alanine ChEBI	-	nitrogen source
[Ref.: #24892]	L-arabinose ChEBI	+	carbon source
[Ref.: #24892]	L-arginine ChEBI	+	nitrogen source
[Ref.: #24892]	L-asparagine ChEBI	+	nitrogen source
[Ref.: #24892]	L-aspartate ChEBI	+	nitrogen source
[Ref.: #24892]	L-glutamate ChEBI	+	nitrogen source
[Ref.: #24892]	L-glutamine ChEBI	+	nitrogen source
[Ref.: #24892]	L-serine ChEBI	-	nitrogen source
[Ref.: #24892]	L-threonine ChEBI	+	nitrogen source
[Ref.: #24892]	L-tyrosine ChEBI	+	nitrogen source
[Ref.: #24892]	lactose ChEBI	-	carbon source
[Ref.: #24892]	maltose ChEBI	+	carbon source
[Ref.: #24892]	myo-inositol ChEBI	-	carbon source
[Ref.: #24892]	nitrate ChEBI	-	reduction
[Ref.: #24892]	raffinose ChEBI	-	carbon source
[Ref.: #24892]	sucrose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #24892]	catalase	+	1.11.1.6
[Ref.: #24892]	esterase	+
[Ref.: #24892]	urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24419]	Sample type/isolated from	head of an ant (Camponotus japonicus Mayr)
[Ref.: #24419]	Host species	Camponotus japonicus
[Ref.: #24419]	Geographic location (country and/or sea, region)	Heilongjiang province, Harbin, Northeast Agriculture University
[Ref.: #24419]	Country	China
[Ref.: #24419]	Country ISO 3 Code	CHN
[Ref.: #24419]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host

#Arthropoda

#Insecta

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24419]	Streptomyces camponoticapitis strain 2H-TWYE14 16S ribosomal RNA gene, partial sequence	KP784807	1517	ENA	1616125 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces camponoticapitis CGMCC 4.7275	GCA_014646115	scaffold	GenBank	1616125 tax ID	*
[Ref.: #66792]	Streptomyces camponoticapitis strain CGMCC 4.7275	1616125.3	wgs	PATRIC	1616125 tax ID	*

[Ref.: #24892]	GC-content	71.7-72.7 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #24419]	GC-content	72.2 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces camponoticapitis CGMCC 4.7275 NCBI: GCA_014646115.1
[Ref.: #69481]	spore-forming	yes	99	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces camponoticapitis CGMCC 4.7275 NCBI: GCA_014646115.1
[Ref.: #69480]	flagellated	no	97.622	yes
[Ref.: #69480]	gram-positive	yes	87.386	no
[Ref.: #69480]	anaerobic	no	98.95	no
[Ref.: #69480]	aerobic	yes	92.768	yes
[Ref.: #69480]	halophile	no	92.507	yes
[Ref.: #69480]	spore-forming	yes	94.557	no
[Ref.: #69480]	glucose-util	yes	90.95	yes
[Ref.: #69480]	thermophile	no	98.448	yes
[Ref.: #69480]	motile	no	92.648	yes
[Ref.: #69480]	glucose-ferment	no	89.109	no

Availability in culture collections External links

[Ref.: #24419]

Culture collection no.

DSM 100523, CGMCC 4.7275

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SI-ID 396541

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces liangshanensis sp. nov., a novel actinomycete isolated from rhizosphere soil of Fagopyrum tataricum.	Guo YH, Tang XK, Hu SR, Zhou ML, Gao J	Arch Microbiol	10.1007/s00203-021-02294-7	2021	*
Phylogeny	Streptomyces camponoticapitis sp. nov., an actinomycete isolated from the head of an ant (Camponotus japonicus Mayr).	Li Y, Ye L, Wang X, Zhao J, Ma Z, Yan K, Xiang W, Liu C	Int J Syst Evol Microbiol	10.1099/ijsem.0.001276	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24419

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100523

#24892

Y. Y. Li, Lan,Wang, Xiangjing,Zhao, Junwei,Ma, Zhaoxu,Yan, Kai,Xiang, Wensheng,Liu, Chongxi: Streptomyces camponoticapitis sp. nov., an actinomycete isolated from the head of an ant (Camponotus japonicus Mayr). IJSEM 66: 3855 - 3859 2016 ( DOI 10.1099/ijsem.0.001276 , PubMed 27381566 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#90944

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID396541.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces camponoticapitis CGMCC 4.7275

Streptomyces camponoticapitis CGMCC 4.7275

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