Streptomyces camponoticapitis (DSM 100523, CGMCC 4.7275, 2H-TWYE14)

Name: Streptomyces camponoticapitis (DSM 100523, CGMCC 4.7275, 2H-TWYE14)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 132630

Type strain

Strain Designation 2H-TWYE14

Culture col. no. DSM 100523 CGMCC 4.7275 2H-TWYE14

NCBI tax ID(s) 1616125

Special Collections DSMZ Literature strains

History <- C. Liu, Northeast Agricultural Univ., Harbin, China; 2H-TWYE14

Links

Streptomyces camponoticapitis 2H-TWYE14 is an aerobe, Gram-positive, spore-shaped bacterium that has a greyish yellow pigmentation and was isolated from head of an ant .

Gram-positive spore-shaped pigmented aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 396541

DSM 100523

@ref 20215

Last LPSN update 2026-02-09 11:31:45

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces camponoticapitis

Full scientific name Streptomyces camponoticapitis Li et al. 2016

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
24892	positive	spore-shaped
125439	positive		99.4
125438			91
125438	positive		92.209

Pigmentation

@ref	Production	Color	Name
24892		greyish yellow	soluble pigment

Multimedia

@ref:	24419
multimedia content:	DSM_100523.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_100523.jpg
caption:	Medium 65 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
24419	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)		Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
24419	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
24419	positive	growth	28
24892	positive	growth	10-37
24892	positive	optimum	28

Culture pH

@ref	Ability	Type	PH	PH range
24892	positive	optimum	7.0-8.0
24892	positive	growth	6.0-10.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
24892	aerobe
125438	aerobe	91.607
125439	obligate aerobe	98.2

Halophily

@ref	Salt	Growth	Tested relation	Concentration
24892	NaCl	positive	maximum	1 %(w/v)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
24892	16919 ChEBI	creatine	+	nitrogen source
24892	15824 ChEBI	D-fructose	-	carbon source
24892	12936 ChEBI	D-galactose	+	carbon source
24892	17634 ChEBI	D-glucose	+	carbon source
24892	16899 ChEBI	D-mannitol	+	carbon source
24892	16988 ChEBI	D-ribose	+	carbon source
24892	17924 ChEBI	D-sorbitol	-	carbon source
24892	65327 ChEBI	D-xylose	+	carbon source
24892	15428 ChEBI	glycine	-	nitrogen source
24892	16977 ChEBI	L-alanine	-	nitrogen source
24892	30849 ChEBI	L-arabinose	+	carbon source
24892	16467 ChEBI	L-arginine	+	nitrogen source
24892	17196 ChEBI	L-asparagine	+	nitrogen source
24892	29991 ChEBI	L-aspartate	+	nitrogen source
24892	29985 ChEBI	L-glutamate	+	nitrogen source
24892	18050 ChEBI	L-glutamine	+	nitrogen source
24892	17115 ChEBI	L-serine	-	nitrogen source
24892	16857 ChEBI	L-threonine	+	nitrogen source
24892	17895 ChEBI	L-tyrosine	+	nitrogen source
24892	17716 ChEBI	lactose	-	carbon source
24892	17306 ChEBI	maltose	+	carbon source
24892	17268 ChEBI	myo-inositol	-	carbon source
24892	17632 ChEBI	nitrate	-	reduction
24892	16634 ChEBI	raffinose	-	carbon source
24892	17992 ChEBI	sucrose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
24892	catalase	+	1.11.1.6
24892	esterase	+
24892	urease	+	3.5.1.5

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Arthropoda	#Insecta

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
24419	head of an ant (Camponotus japonicus Mayr)	Camponotus japonicus	Heilongjiang province, Harbin, Northeast Agriculture University	China	CHN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
24419	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1464611v1 assembly for Streptomyces camponoticapitis CGMCC 4.7275	scaffold	GCA_014646115	1616125.3	2989890692	1616125	57.13

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
24419	Streptomyces camponoticapitis strain 2H-TWYE14 16S ribosomal RNA gene, partial sequence	KP784807	1517		1616125

GC content

@ref	GC-content (mol%)	Method
24892	71.7-72.7	thermal denaturation, midpoint method (Tm)
24419	72.2	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptomyces camponoticapitis CGMCC 4.7275
NCBI: GCA_014646115

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	76.80	no
125439	motility	BacteriaNetⓘ	no	86.80	no
125439	gram_stain	BacteriaNetⓘ	positive	99.40	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces camponoticapitis CGMCC 4.7275
NCBI: GCA_014646115.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	92.21	yes
125438	anaerobic	anaerobicⓘ	no	90.17	yes
125438	aerobic	aerobicⓘ	yes	91.61	yes
125438	spore-forming	spore-formingⓘ	yes	89.07	no
125438	thermophilic	thermophileⓘ	no	97.50	yes
125438	flagellated	motile2+ⓘ	no	91.00	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces liangshanensis sp. nov., a novel actinomycete isolated from rhizosphere soil of Fagopyrum tataricum.	Guo YH, Tang XK, Hu SR, Zhou ML, Gao J	Arch Microbiol	10.1007/s00203-021-02294-7	2021
Phylogeny	Streptomyces camponoticapitis sp. nov., an actinomycete isolated from the head of an ant (Camponotus japonicus Mayr).	Li Y, Ye L, Wang X, Zhao J, Ma Z, Yan K, Xiang W, Liu C	Int J Syst Evol Microbiol	10.1099/ijsem.0.001276	2016

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#24419	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100523
#24892	Y. Y. Li, Lan,Wang, Xiangjing,Zhao, Junwei,Ma, Zhaoxu,Yan, Kai,Xiang, Wensheng,Liu, Chongxi: Streptomyces camponoticapitis sp. nov., an actinomycete isolated from the head of an ant (Camponotus japonicus Mayr). IJSEM 66: 3855 - 3859 2016 ( DOI 10.1099/ijsem.0.001276 , PubMed 27381566 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces camponoticapitis (DSM 100523, CGMCC 4.7275, 2H-TWYE14)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014646115

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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