Strain identifier

BacDive ID: 13259

Type strain: Yes

Species: Amycolatopsis nigrescens

Strain Designation: CSC17Ta-90

Culture col. no.: DSM 44992, CIP 109581, NRRL B-24473, HKI 0330, CSC 17TA-090, JCM 14717

Strain history: CIP <- 2007, DSMZ <- HKI <- C. Weigel: strain CSC17Ta-90

NCBI tax ID(s): 1068980 (strain), 381445 (species)

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Amycolatopsis nigrescens CSC17Ta-90 is an aerobe, spore-forming, mesophilic bacterium that was isolated from wall of an arcosolium in the catacomb St. Callistus.

  1. Gram-positive
  2. spore-forming
  3. aerobe
  4. mesophilic
  5. 16S sequence
  6. Bacteria
  7. genome sequence
  • Information on culture and growth conditions Culture and growth conditionsarrow_down
    • [Ref.: #12224] Culture medium
    GPHF-MEDIUM (DSMZ Medium 553)
    [Ref.: #12224] Culture medium growth Yes
    [Ref.: #12224] Culture medium link Medium recipe at MediaDive MediaDive
    [Ref.: #12224] Culture medium composition expand / minimize
     
    [Ref.: #12224] Culture medium
    GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
    [Ref.: #12224] Culture medium growth Yes
    [Ref.: #12224] Culture medium link Medium recipe at MediaDive MediaDive
    [Ref.: #12224] Culture medium composition expand / minimize
     
    [Ref.: #20153] Culture medium
    ISP 2
    [Ref.: #20153] Culture medium growth Yes
    [Ref.: #20153] Culture medium composition expand / minimize
     
    [Ref.: #20153] Culture medium
    ISP 3
    [Ref.: #20153] Culture medium growth Yes
    [Ref.: #20153] Culture medium composition expand / minimize
     
    [Ref.: #20153] Culture medium
    ISP 4
    [Ref.: #20153] Culture medium growth Yes
    [Ref.: #20153] Culture medium composition expand / minimize
     
    [Ref.: #20153] Culture medium
    ISP 5
    [Ref.: #20153] Culture medium growth Yes
    [Ref.: #20153] Culture medium composition expand / minimize
     
    [Ref.: #20153] Culture medium
    ISP 6
    [Ref.: #20153] Culture medium growth Yes
    [Ref.: #20153] Culture medium composition expand / minimize
     
    [Ref.: #20153] Culture medium
    ISP 7
    [Ref.: #20153] Culture medium growth Yes
    [Ref.: #20153] Culture medium composition expand / minimize
     
    [Ref.: #33311] Culture medium
    MEDIUM 57 - for Streptomyces, Nocardioides, Lentzea albidocapillata and Streptoverticillium reticulum
    [Ref.: #33311] Culture medium growth Yes
    [Ref.: #33311] Culture medium composition expand / minimize
     
    [Ref.: #121296] Culture medium
    CIP Medium 57
    [Ref.: #121296] Culture medium growth Yes
    [Ref.: #121296] Culture medium link Medium recipe provided by DSMZ
    Temperatures Kind of temperaturearrow to sort Temperaturearrow to sort
    [Ref.: #12224] growth 28  °C
    [Ref.: #20153] optimum 28  °C
    [Ref.: #31889] growth 11-40  °C
    [Ref.: #31889] optimum 31.5  °C
    [Ref.: #33311] growth 30  °C
    [Ref.: #67770] growth 28  °C
     
    [Ref.: #12224] Temperature range mesophilic
    [Ref.: #20153] Temperature range mesophilic
    [Ref.: #31889] Temperature range mesophilic
    [Ref.: #33311] Temperature range mesophilic
    [Ref.: #67770] Temperature range mesophilic
    pH Kind of pHarrow to sort pHarrow to sort
    [Ref.: #31889] optimum 7
    [Ref.: #31889] growth 05-09
  • Availability in culture collections External linksarrow_down
    • [Ref.: #12224] Culture collection no. DSM 44992, CIP 109581, NRRL B-24473, HKI 0330, CSC 17TA-090, JCM 14717
    [Ref.: #82463] SI-ID 297123 *
    Literature:
    Topicarrow to sort Titlearrow to sort Authorsarrow to sort Journalarrow to sort DOIarrow to sort Yeararrow to sort
    Phylogeny Amycolatopsis anabasis sp. nov., a novel endophytic actinobacterium isolated from roots of Anabasis elatior. Wang HF, Li XY, Gao R, Xie YG, Xiao M, Li QL, Li WJ Int J Syst Evol Microbiol 10.1099/ijsem.0.004184 2020 *
    Phylogeny Amycolatopsis antarctica sp. nov., isolated from the surface of an Antarctic brown macroalga. Wang J, Leiva S, Huang J, Huang Y Int J Syst Evol Microbiol 10.1099/ijsem.0.002844 2018 *
    Phylogeny Amycolatopsis xuchangensis sp. nov. and Amycolatopsis jiguanensis sp. nov., isolated from soil. Huang JR, Ming H, Li S, Zhao ZL, Meng XL, Zhang JX, Tang Z, Li WJ, Nie GX Antonie Van Leeuwenhoek 10.1007/s10482-016-0742-1 2016 *
    Phylogeny Amycolatopsis magusensis sp. nov., isolated from soil. Camas M, Sahin N, Sazak A, Sproer C, Klenk HP Int J Syst Evol Microbiol 10.1099/ijs.0.042770-0 2012 *
    Phylogeny Amycolatopsis nigrescens sp. nov., an actinomycete isolated from a Roman catacomb. Groth I, Tan GYA, Gonzalez JM, Laiz L, Carlsohn MR, Schutze B, Wink J, Goodfellow M Int J Syst Evol Microbiol 10.1099/ijs.0.64602-0 2007 *

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