Name: Actinocorallia lasiicapitis 3H-GS17
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132532

Type strain:

Species: Actinocorallia lasiicapitis

Strain Designation: 3H-GS17

Culture col. no.: DSM 100595, CGMCC 4.7282, JCM 31763

Strain history: CGMCC 4.7282 <-- C. Liu; Northeast Agric. Univ., China; 3H-GS17.

NCBI tax ID(s): 1677853 (species)

SI-ID 400568

DSM 100595

Section

Actinocorallia lasiicapitis 3H-GS17 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from head of an ant .

Gram-positive
spore-forming
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Thermomonosporaceae*
	Genus	*Actinocorallia*
	Species	**Actinocorallia lasiicapitis**
	Full Scientific Name (LPSN)	Actinocorallia lasiicapitis Liu et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #43630]	Gram stain	positive

[Ref.: #43630]	Motility	no

Multimedia content

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Caption:

Medium 554 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium

N-Z-AMINE-MEDIUM (DSMZ Medium 554)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

		Temperature
[Ref.: #24321]	growth	28 °C
[Ref.: #43630]	growth	4-37 °C
[Ref.: #43630]	optimum	25--30 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #24321]	Temperature range	mesophilic
[Ref.: #43630]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43630]			optimum	6-8
[Ref.: #43630]			growth	5-10

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

[Ref.: #43630]	Spore description	non-motile, oval
[Ref.: #43630]	Type of spore	spore
[Ref.: #43630]	Ability of spore formation	yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43630]		NaCl		growth	0-3	%(w/v)

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Observation

quinones: MK-9(H₄), MK-9(H₆), MK-9(H₈)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43630]	cellulose ChEBI	-	hydrolysis
[Ref.: #43630]	creatine ChEBI	+	nitrogen source
[Ref.: #43630]	D-fructose ChEBI	-	carbon source
[Ref.: #43630]	D-galactose ChEBI	-	carbon source
[Ref.: #43630]	D-glucose ChEBI	+	carbon source
[Ref.: #43630]	D-mannitol ChEBI	-	carbon source
[Ref.: #43630]	D-ribose ChEBI	+	carbon source
[Ref.: #43630]	D-sorbitol ChEBI	-	carbon source
[Ref.: #43630]	D-xylose ChEBI	+	carbon source
[Ref.: #43630]	esculin ChEBI	+	hydrolysis
[Ref.: #43630]	gelatin ChEBI	-	hydrolysis
[Ref.: #43630]	glycine ChEBI	-	nitrogen source
[Ref.: #43630]	L-alanine ChEBI	+	nitrogen source
[Ref.: #43630]	L-arabinose ChEBI	-	carbon source
[Ref.: #43630]	L-arginine ChEBI	+	nitrogen source
[Ref.: #43630]	L-asparagine ChEBI	+	nitrogen source
[Ref.: #43630]	L-aspartate ChEBI	+	nitrogen source
[Ref.: #43630]	L-glutamate ChEBI	+	nitrogen source
[Ref.: #43630]	L-glutamine ChEBI	+	nitrogen source
[Ref.: #43630]	L-rhamnose ChEBI	-	carbon source
[Ref.: #43630]	L-serine ChEBI	-	nitrogen source
[Ref.: #43630]	L-threonine ChEBI	+	nitrogen source
[Ref.: #43630]	L-tyrosine ChEBI	+	nitrogen source
[Ref.: #43630]	lactose ChEBI	+	carbon source
[Ref.: #43630]	maltose ChEBI	+	carbon source
[Ref.: #43630]	myo-inositol ChEBI	-	carbon source
[Ref.: #43630]	nitrate ChEBI	-	reduction
[Ref.: #43630]	raffinose ChEBI	+	carbon source
[Ref.: #43630]	starch ChEBI	-	hydrolysis
[Ref.: #43630]	sucrose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #43630]		hydrogen sulfide ChEBI	no

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #43630]		esterase	-
[Ref.: #43630]		urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24321]	Sample type/isolated from	head of an ant (L. fuliginosus L.)
[Ref.: #24321]	Host species	Lasius fuliginosus
[Ref.: #24321]	Geographic location (country and/or sea, region)	Heilongjiang province, Harbin, Northeast Agriculture University
[Ref.: #24321]	Country	China
[Ref.: #24321]	Country ISO 3 Code	CHN
[Ref.: #24321]	Continent	Asia

[Ref.: #43630]	Sample type/isolated from	the head of L. fuliginosus L. collected from Northeast Agriculture University
[Ref.: #43630]	Geographic location (country and/or sea, region)	Harbin, Heilongjiang
[Ref.: #43630]	Country	China
[Ref.: #43630]	Country ISO 3 Code	CHN
[Ref.: #43630]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Head of an ant (Lasius fuliginosus L.) from Northeast Agric. Univ.
[Ref.: #67770]	Host species	Lasius fuliginosus L.
[Ref.: #67770]	Geographic location (country and/or sea, region)	Harbin, Heilongjiang
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Arthropoda	#Insecta
#Host Body-Site	#Other	-

What are isolation sources categories?

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Global distribution of 16S sequence KR261652 (>99% sequence identity) for Actinocorallia lasiicapitis subclade from Microbeatlas

Aquatic Samples	5
Soil Samples	265
Animal Samples	7
Plant Samples	37
Total Samples	314

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24321]	Actinocorallia lasiicapitis strain 3H-GS17 16S ribosomal RNA gene, partial sequence	KR261652	1508	ENA	1677853 tax ID

[Ref.: #24321]	GC-content	70.7 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	70-71.4 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

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Culture collection no.

DSM 100595, CGMCC 4.7282, JCM 31763

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SI-ID 400568

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinocorallia lasiicapitis sp. nov., an actinomycete isolated from the head of an ant (Lasius fuliginosus L.).	Liu C, Li Y, Ye L, Zhao J, Piao C, Li Z, Li J, Xiang W, Wang X	Int J Syst Evol Microbiol	10.1099/ijsem.0.001005	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24321

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100595

#43630

Chongxi Liu, Yao Li, Lan Ye, Junwei Zhao, Chenyu Piao, Zhilei Li, Jiansong Li, Wensheng Xiang, Xiangjing Wang: Actinocorallia lasiicapitis sp. nov., an actinomycete isolated from the head of an ant (Lasius fuliginosus L.). IJSEM 66: 2172 - 2177 2016 ( DOI 10.1099/ijsem.0.001005 , PubMed 26944933 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#90858

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400568.1 )

* These data were automatically processed and therefore are not curated

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