Micromonospora mangrovi (DSM 45761, CCTCC AA 2012012, 2803GPT1-18)

Name: Micromonospora mangrovi (DSM 45761, CCTCC AA 2012012, 2803GPT1-18)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 132507

Type strain

Strain Designation 2803GPT1-18

Culture col. no. DSM 45761 CCTCC AA 2012012 2803GPT1-18 JCM 33231

NCBI tax ID(s) 1182597

Special Collections DSMZ JCM Wink compendium

Links

Micromonospora mangrovi 2803GPT1-18 is a mesophilic prokaryote that was isolated from composite mangrove soil sample.

mesophilic 16S sequence

Name and taxonomic classification

SI-ID 398047

DSM 45761

@ref 20215

Last LPSN update 2025-12-16 10:01:32

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Micromonosporales

Family Micromonosporaceae

Genus Micromonospora

Species Micromonospora mangrovi

Full scientific name Micromonospora mangrovi Xie et al. 2016

Morphology

Colony morphology

@ref	Colony color	Medium used
69426	Golden yellow (1004), nut brown (8011)	ISP 6
69426	Fawn brown (8007), terra brown (8028)	ISP 5
69426	Daffodil yellow (1007), signal orange (2010)	ISP 3
69426	Copper brown (8004)	ISP 4
69426	Maize yellow (1006)	suter without tyrosine
69426	Olive drab (6022)	ISP 7
69426	Sepia brown (8014)	ISP 2
69426	Signal brown (8002)	suter with tyrosine

Multicellular morphology

@ref	Complex name	Medium name
69426	Aerial mycelium	ISP 2
69426	Aerial mycelium	ISP 3
69426	Aerial mycelium	ISP 4
69426	Aerial mycelium	ISP 5
69426	Aerial mycelium	ISP 6
69426	Aerial mycelium	ISP 7
69426	Aerial mycelium	suter with tyrosine
69426	Aerial mycelium	suter without tyrosine

Pigmentation

@ref	Production	Name
69426		Melanin
69426		soluble pigment

Multimedia

@ref:	24296
multimedia content:	DSM_45761.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_45761.jpg
caption:	Medium 554 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

@ref:	69426
multimedia content:	DSM_45761_image3.jpeg
multimedia.multimedia content:	DSM_45761_image3.jpeg
caption:	Plates (554, ISP2, ISP3, ISP4, ISP5, ISP7)
intellectual property rights:	Helmholtz-Zentrum für Infektionsforschung GmbH
manual_annotation:	1

@ref:	69426
multimedia content:	DSM_45761_image4.jpeg
multimedia.multimedia content:	DSM_45761_image4.jpeg
caption:	Plates (554, ISP2, ISP3, ISP4, ISP5, ISP7)
intellectual property rights:	Helmholtz-Zentrum für Infektionsforschung GmbH
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
24296	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 20.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
24296	N-Z-AMINE-MEDIUM (DSMZ Medium 554)		Medium recipe at MediaDive	Name: N-Z-AMINE-MEDIUM (DSMZ Medium 554) Composition: Starch 20.0 g/l Agar 20.0 g/l Glucose 10.0 g/l N-Z amine 5.0 g/l Yeast extract 5.0 g/l CaCO3 1.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
24296	positive	growth	28	mesophilic
67770	positive	growth	28	mesophilic

Physiology and metabolism

Halophily

@ref	Salt	Growth	Tested relation	Concentration
69426	NaCl	positive	growth	0 %

Observation

67770

Observationquinones: MK-10(H₆), MK-9(H₆), MK-9(H₄)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
69426	22599 ChEBI	arabinose	-	growth
69426	62968 ChEBI	cellulose	+/-	growth
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	+	hydrolysis	from API Coryne
69426	28757 ChEBI	fructose	+/-	growth
68379	5291 ChEBI	gelatin	+	hydrolysis	from API Coryne
69426	17234 ChEBI	glucose	+	growth
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
69426	17268 ChEBI	inositol	-	growth
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
69426	37684 ChEBI	mannose	+/-	growth
68379	17632 ChEBI	nitrate	+	reduction	from API Coryne
69426	16634 ChEBI	raffinose	+	growth
69426	26546 ChEBI	rhamnose	+/-	growth
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
69426	17992 ChEBI	sucrose	+	growth
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
69426	18222 ChEBI	xylose	+	growth

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
68379	beta-galactosidase	+	3.2.1.23	from API Coryne
68382	beta-glucosidase	+	3.2.1.21	from API zym
68379	beta-glucosidase	+	3.2.1.21	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
68379	gelatinase	+		from API Coryne
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API Coryne
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68382	trypsin	+	3.4.21.4	from API zym
68379	urease	-	3.5.1.5	from API Coryne

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
69426	+	-	-	+	-	+	+	+	+	-	+	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
69426	not determinedn.d.	+/-	+/-	+/-	-	+	+/-	+/-	+	+	+	+/-	+	+	-	+	+	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Biodegradation	#Composting
#Environmental	#Aquatic	#Mangrove
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
24296	composite mangrove soil sample	Guangxi province, Beihai (N 21° 24.463', E 109° 11.147')	China	CHN	Asia	21.4076	109.186 21.4076/109.186
67770	Mangrove soil in Beihai	Guangxi Province	China	CHN	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
24296	1	Risk group (German classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
24296	Micromonospora mangrovi strain 2803GPT1-18 16S ribosomal RNA gene, partial sequence	JQ836668	1476		1182597

GC content

@ref	GC-content (mol%)	Method
24296	71.2	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Micromonospora mangrovi sp. nov., isolated from mangrove soil.	Xie QY, Ren J, Li L, Li Y, Deng ZX, Hong K	Antonie Van Leeuwenhoek	10.1007/s10482-015-0641-x	2016

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#24296	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45761
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69426	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Micromonospora mangrovi (DSM 45761, CCTCC AA 2012012, 2803GPT1-18)

Name and taxonomic classification

Morphology

Colony morphology

Multicellular morphology

Pigmentation

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Halophily

Observation

Metabolite utilization

Enzymes

API coryne

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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