Cite this strain

"Bacillus rubiinfantis" (DSM 28615, CSUR P1141, MT2)

BacDive ID 132495

Type strain

Strain Designation MT2

Culture col. no. DSM 28615 CSUR P1141 MT2

NCBI tax ID(s) 1499680

Special Collections DSMZ

History DSMZ <- M. Tidjani Alou, Timone Hospital, Marseille, France; MT2

Links

"Bacillus rubiinfantis" MT2 is a bacterium that was isolated from human feces, child with kwashiorkor living in Niamey, Niger.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 400119

DSM 28615

@ref 20215

Last LPSN update 2026-05-29 08:37:52

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Bacillus

Species "Bacillus rubiinfantis"

Full scientific name Bacillus rubiinfantis Tidjiani Alou et al. 2015

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
24284	BHI MEDIUM (DSMZ Medium 215)		Medium recipe at MediaDive	Name: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
24284	positive	growth	37

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	#Child
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
24284	human feces, child with kwashiorkor living in Niamey, Niger	Homo sapiens	Niamey	Niger	NER	Africa

Taxonmaps

69479

Global distribution of 16S sequence LK021113 (>99% sequence identity) for Neobacillus from Microbeatlas

Aquatic Samples	167
Soil Samples	2062
Animal Samples	268
Plant Samples	186
Total Samples	2683

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	Bacillus rubiinfantis assembly for Bacillus rubiinfantis	contig	GCA_000752035	1499680.3	2617271261	1499680	45.02

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
24284	Bacillus sp. MT2 partial 16S rRNA gene, isolate MT2	LK021113	1514		1499680

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Bacillus rubiinfantis assembly for Bacillus rubiinfantis
NCBI: GCA_000752035

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	76.87	no
125439	gram_stain	BacteriaNetⓘ	variable	68.04	no
125439	spore_formation	BacteriaNetⓘ	yes	74.35	no
125439	motility	BacteriaNetⓘ	yes	68.30	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Gut Bacteria Missing in Severe Acute Malnutrition, Can We Identify Potential Probiotics by Culturomics?	Tidjani Alou M, Million M, Traore SI, Mouelhi D, Khelaifia S, Bachar D, Caputo A, Delerce J, Brah S, Alhousseini D, Sokhna C, Robert C, Diallo BA, Diallo A, Parola P, Golden M, Lagier JC, Raoult D.	Front Microbiol	10.3389/fmicb.2017.00899	2017
Genetics	Bacillus rubiinfantis sp. nov. strain mt2(T), a new bacterial species isolated from human gut.	Tidjiani Alou M, Rathored J, Khelaifia S, Michelle C, Brah S, Diallo BA, Raoult D, Lagier JC.	New Microbes New Infect	10.1016/j.nmni.2015.09.008	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#24284	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28615
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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"Bacillus rubiinfantis" (DSM 28615, CSUR P1141, MT2)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_000752035

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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