Name: Nocardioides massiliensis GD13
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132492

Type strain:

Species: Nocardioides massiliensis

Strain Designation: GD13

Culture col. no.: DSM 28216, CSUR P894

Strain history: <- G. Dubourg, Timone Hospital, Marseille, France; GD13

NCBI tax ID(s): 1325935 (species)

SI-ID 406771

DSM 28216

Other strains from Nocardioides massiliensis

N. massiliensis GD13, DSM 27065

Section

Nocardioides massiliensis GD13 is a mesophilic bacterium that was isolated from human feces, 62-year old man with Guillain-Barré syndrome.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Propionibacteriales*
	Family	*Nocardioidaceae*
	Genus	*Nocardioides*
	Species	**Nocardioides massiliensis**
	Full Scientific Name (LPSN)	Nocardioides massiliensis Dubourg et al. 2016

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24281]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #24281]

Culture medium growth

[Ref.: #24281]

Culture medium link

Medium recipe at MediaDive

[Ref.: #24281]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24281]			growth	30 °C

[Ref.: #24281]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24281]	Sample type/isolated from	human feces, 62-year old man with Guillain-Barré syndrome
[Ref.: #24281]	Geographic location (country and/or sea, region)	Marseille
[Ref.: #24281]	Country	France
[Ref.: #24281]	Country ISO 3 Code	FRA
[Ref.: #24281]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Human	#Male
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #24281]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24281]	Nocardioides sp. GD13 partial 16S rRNA gene, isolate GD13	HF952922	1345	ENA	1325935 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Nocardioides massiliensis DSM 28216	2923494085	draft	JGI IMG/M	1325935 tax ID	*

[Ref.: #24281]

GC-content

71.0 mol%

sequence analysis

Availability in culture collections External links

[Ref.: #24281]

Culture collection no.

DSM 28216, CSUR P894

[Ref.: #90822]

SI-ID 406771

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24281

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28216

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#90822

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406771.1 )

* These data were automatically processed and therefore are not curated

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