Name: Streptosporangium lutulentum NEAU-FHSN1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 132474

Type strain:

Species: Streptosporangium lutulentum

Strain Designation: NEAU-FHSN1

Culture col. no.: DSM 46740, CGMCC 4.7141, JCM 33409

Strain history: CGMCC 4.7141 <-- W. Xiang and X. Wang; Northeast Agric. Univ., China; NEAU-FHSN1.

NCBI tax ID(s): 1461250 (species)

SI-ID 407753

DSM 46740

Special Collections

Section

When using BacDive for research please cite our paper

Streptosporangium lutulentum NEAU-FHSN1 is a mesophilic bacterium that was isolated from muddy soil from a stream base.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Streptosporangiaceae*
	Genus	*Streptosporangium*
	Species	**Streptosporangium lutulentum**
	Full Scientific Name (LPSN)	Streptosporangium lutulentum Fang et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #125439]	Gram stain	positive Confidence in %98.5

[Ref.: #69469]	Colony color	Colourless
[Ref.: #69469]	Cultivation medium used	ISP 5

[Ref.: #69469]	Colony color	Colourless
[Ref.: #69469]	Cultivation medium used	ISP 7

[Ref.: #69469]	Colony color	Colourless
[Ref.: #69469]	Cultivation medium used	suter with tyrosine

[Ref.: #69469]	Colony color	Beige (1001)
[Ref.: #69469]	Cultivation medium used	ISP 2

[Ref.: #69469]	Colony color	Ivory (1014)
[Ref.: #69469]	Cultivation medium used	ISP 3

[Ref.: #69469]	Colony color	Ivory (1014)
[Ref.: #69469]	Cultivation medium used	ISP 4

[Ref.: #69469]	Colony color	Light ivory (1015)
[Ref.: #69469]	Cultivation medium used	suter without tyrosine

[Ref.: #69469]	Colony color	Sand yellow (1002)
[Ref.: #69469]	Cultivation medium used	ISP 6

[Ref.: #69469]	Pigment production	no
[Ref.: #69469]	Pigment name	Melanin
[Ref.: #69469]	Pigment production	yes
[Ref.: #69469]	Pigmentation color	Sand yellow (1002), ivory (1014), beige (1001)
[Ref.: #69469]	Pigment name	soluble pigment

[Ref.: #69469]	Multicellular complex forming ability	no
[Ref.: #69469]	Multicellular complex name	Aerial mycelium
[Ref.: #69469]	Medium Name (multicellularity)	ISP 2

[Ref.: #69469]	Multicellular complex forming ability	no
[Ref.: #69469]	Multicellular complex name	Aerial mycelium
[Ref.: #69469]	Medium Name (multicellularity)	ISP 3

[Ref.: #69469]	Multicellular complex forming ability	no
[Ref.: #69469]	Multicellular complex name	Aerial mycelium
[Ref.: #69469]	Medium Name (multicellularity)	ISP 4

[Ref.: #69469]	Multicellular complex forming ability	no
[Ref.: #69469]	Multicellular complex name	Aerial mycelium
[Ref.: #69469]	Medium Name (multicellularity)	ISP 5

[Ref.: #69469]	Multicellular complex forming ability	no
[Ref.: #69469]	Multicellular complex name	Aerial mycelium
[Ref.: #69469]	Medium Name (multicellularity)	ISP 6

[Ref.: #69469]	Multicellular complex forming ability	no
[Ref.: #69469]	Multicellular complex name	Aerial mycelium
[Ref.: #69469]	Medium Name (multicellularity)	ISP 7

[Ref.: #69469]	Multicellular complex forming ability	no
[Ref.: #69469]	Multicellular complex name	Aerial mycelium
[Ref.: #69469]	Medium Name (multicellularity)	suter with tyrosine

[Ref.: #69469]	Multicellular complex forming ability	no
[Ref.: #69469]	Multicellular complex name	Aerial mycelium
[Ref.: #69469]	Medium Name (multicellularity)	suter without tyrosine

Multimedia content

[Ref.: #24263]

Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #24263]

Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

[Ref.: #24263]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #24263]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24263]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #125439]

Oxygen tolerance

obligate aerobe Confidence in %94.1

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #69469]		NaCl		growth	0	%

[Ref.: #67770]

Observation

quinones: MK-9(H₂), MK-8(H₄), MK-9(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #69469]	arabinose ChEBI	+	growth
[Ref.: #69469]	cellulose ChEBI	+	growth
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #69469]	fructose ChEBI	+	growth
[Ref.: #68379]	gelatin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #69469]	glucose ChEBI	+	growth
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #69469]	inositol ChEBI	+	growth
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #69469]	mannose ChEBI	+	growth
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #69469]	raffinose ChEBI	+	growth
[Ref.: #69469]	rhamnose ChEBI	+	growth
[Ref.: #69469]	sucrose ChEBI	+	growth
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	urea ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #69469]	xylose ChEBI	+	growth
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym, API Coryne
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym, API Coryne
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym, API Coryne
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym, API Coryne
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym, API Coryne
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #68379]	gelatinase	+		* from API Coryne
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym, API Coryne
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #69469]	3962	-	-	+	+	-	+	+	+	+	-	+	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #69469]	6146	not determinedn.d.	+	+/-	+/-	-	+	+	+	+	+	+	+/-	+	+	-	+	+	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24263]	Sample type/isolated from	muddy soil from a stream base
[Ref.: #24263]	Geographic location (country and/or sea, region)	Heilongjiang Province, Harbin, Wuchang, National Forest Park of Fenghuang Mountain (42° 21' N, 127° 99' E)
[Ref.: #24263]	Country	China
[Ref.: #24263]	Country ISO 3 Code	CHN
[Ref.: #24263]	Continent	Asia
[Ref.: #24263]	Geographic location	44.2000°/128.0500°

[Ref.: #67770]	Sample type/isolated from	Muddy soil from a stream base from Fenghuang Mountain in Wuchang
[Ref.: #67770]	Geographic location (country and/or sea, region)	Heilongjiang Province, north China
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Mud (Sludge)
#Environmental	#Aquatic	#River (Creek)
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #24263]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24263]	Streptosporangium lutulentum strain NEAU-FHSN1 16S ribosomal RNA gene, partial sequence	KF887910	1514	GenBank ENA	1461250 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptosporangium lutulentum DSM 46740	2923618136	draft	JGI IMG/M	1461250 tax ID	*

[Ref.: #24263]	GC-content	66.6 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	66.3-66.9 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Model	Trait	Prediction	Confidence in %
	Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptosporangium lutulentum DSM 46740 IMG: 2923618136
[Ref.: #125439]	BacteriaNet	spore_formationⓘ	yes	67.8
[Ref.: #125439]	BacteriaNet	motilityⓘ	no	86.3
[Ref.: #125439]	BacteriaNet	gram_stainⓘ	positive	98.5
[Ref.: #125439]	BacteriaNet	oxygen_toleranceⓘ	obligate aerobe	94.1

Availability in culture collections External links

[Ref.: #24263]

Culture collection no.

DSM 46740, CGMCC 4.7141, JCM 33409

[Ref.: #90808]

SI-ID 407753

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptosporangium lutulentum sp. nov., Streptosporangium fenghuangense sp. nov. and Streptosporangium corydalis sp. nov., three novel actinobacterial species isolated from National Forest Park of Fenghuang Mountain.	Fang B, Liu H, Pan T, Liu C, Guan X, He H, Yan K, Li J, Xiang W, Wang X	Antonie Van Leeuwenhoek	10.1007/s10482-016-0650-4	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24263

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46740

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69469

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#90808

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID407753.1 )

#125439

Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

* These data were automatically processed and therefore are not curated

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Streptosporangium lutulentum DSM 46740

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