Mariniluteicoccus endophyticus (DSM 28728, JCM 30097, KCTC 29482)

Name: Mariniluteicoccus endophyticus (DSM 28728, JCM 30097, KCTC 29482)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 132434

Type strain

Culture col. no. DSM 28728 JCM 30097 KCTC 29482 YIM 2617

NCBI tax ID(s) 1642469

Special Collections DSMZ JCM KCTC Literature strains

History <- W.-J. Li, YIM; YIM 2617 <- B. Liu W.-J. Li YIM 2617.

Links

Mariniluteicoccus endophyticus DSM 28728 is an obligate anaerobe, Gram-positive, coccus-shaped bacterium that was isolated from surface-sterilized root of Ocimum basilicum.

Gram-positive coccus-shaped obligate anaerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 405852

KCTC 29482,JCM 30097,DSM 28728

@ref 20215

Last LPSN update 2026-02-09 11:31:42

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Propionibacteriales

Family Propionibacteriaceae

Genus Mariniluteicoccus

Species Mariniluteicoccus endophyticus

Full scientific name Mariniluteicoccus endophyticus Liu et al. 2016

BacDive ID	Other strains from **Mariniluteicoccus endophyticus** (2)	Type strain
132968	M. endophyticus DSM 28730, YIM 2617-2
163707	M. endophyticus JCM 30098

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell shape	Motility
43727	positive	0.7-1.1 µm	coccus-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
24223	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
24223	positive	growth	28
43727	positive	growth	10-42
43727	positive	optimum	28-32
67770	positive	growth	37

Culture pH

@ref	Ability	Type	PH	PH range
43727	positive	optimum	7-8
43727	positive	growth	6-9	alkaliphile

Physiology and metabolism

Oxygen tolerance

43727

Oxygen toleranceobligate anaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
43727	NaCl	positive	growth	0-4.5 %(w/v)
43727	NaCl	positive	optimum	0-1 %(w/v)

Observation

67770

Observationquinones: MK-9(H₄)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43727	16808 ChEBI	2-dehydro-D-gluconate	-	builds acid from
43727	58143 ChEBI	5-dehydro-D-gluconate	-	builds acid from
43727	17128 ChEBI	adipate	+	carbon source
43727	17128 ChEBI	adipate	+	nitrogen source
43727	27613 ChEBI	amygdalin	-	builds acid from
43727	22605 ChEBI	arabinitol	-	builds acid from
43727	22599 ChEBI	arabinose	-	builds acid from
43727	18305 ChEBI	arbutin	+	builds acid from
43727		casein	-	hydrolysis
43727	17057 ChEBI	cellobiose	+	builds acid from
43727	17057 ChEBI	cellobiose	+	carbon source
43727	17057 ChEBI	cellobiose	+	nitrogen source
43727	16947 ChEBI	citrate	-	carbon source
43727	16947 ChEBI	citrate	-	nitrogen source
43727	17108 ChEBI	D-arabinose	-	carbon source
43727	17108 ChEBI	D-arabinose	-	nitrogen source
43727	15824 ChEBI	D-fructose	+	builds acid from
43727	15824 ChEBI	D-fructose	+	carbon source
43727	15824 ChEBI	D-fructose	+	nitrogen source
43727	12936 ChEBI	D-galactose	-	builds acid from
43727	12936 ChEBI	D-galactose	+	carbon source
43727	17634 ChEBI	D-glucose	+	builds acid from
43727	17634 ChEBI	D-glucose	+	carbon source
43727	17634 ChEBI	D-glucose	+	nitrogen source
43727	62318 ChEBI	D-lyxose	-	builds acid from
43727	16899 ChEBI	D-mannitol	-	builds acid from
43727	16899 ChEBI	D-mannitol	-	carbon source
43727	16899 ChEBI	D-mannitol	-	nitrogen source
43727	16024 ChEBI	D-mannose	+	builds acid from
43727	16024 ChEBI	D-mannose	+	carbon source
43727	16024 ChEBI	D-mannose	+	nitrogen source
43727	16988 ChEBI	D-ribose	-	builds acid from
43727	16443 ChEBI	D-tagatose	-	builds acid from
43727	27689 ChEBI	decanoate	-	carbon source
43727	27689 ChEBI	decanoate	-	nitrogen source
43727	17113 ChEBI	erythritol	-	builds acid from
43727	4853 ChEBI	esculin	+	builds acid from
43727	33984 ChEBI	fucose	-	builds acid from
43727	16813 ChEBI	galactitol	-	builds acid from
43727	5291 ChEBI	gelatin	-	hydrolysis
43727	28066 ChEBI	gentiobiose	+	builds acid from
43727	24265 ChEBI	gluconate	-	builds acid from
43727	24265 ChEBI	gluconate	+	carbon source
43727	24265 ChEBI	gluconate	+	nitrogen source
43727	17754 ChEBI	glycerol	+	builds acid from
43727	17754 ChEBI	glycerol	+	carbon source
43727	17754 ChEBI	glycerol	+	nitrogen source
43727	28087 ChEBI	glycogen	+	builds acid from
43727	15443 ChEBI	inulin	-	builds acid from
43727	16977 ChEBI	L-alanine	+	carbon source
43727	16977 ChEBI	L-alanine	+	nitrogen source
43727	16467 ChEBI	L-arginine	+	carbon source
43727	16467 ChEBI	L-arginine	+	nitrogen source
43727	29991 ChEBI	L-aspartate	+	carbon source
43727	29991 ChEBI	L-aspartate	+	nitrogen source
43727	62345 ChEBI	L-rhamnose	-	builds acid from
43727	62345 ChEBI	L-rhamnose	+	carbon source
43727	62345 ChEBI	L-rhamnose	+	nitrogen source
43727	17266 ChEBI	L-sorbose	-	builds acid from
43727	17716 ChEBI	lactose	-	builds acid from
43727	17716 ChEBI	lactose	-	carbon source
43727	17716 ChEBI	lactose	-	nitrogen source
43727	25094 ChEBI	lysine	-	carbon source
43727	25094 ChEBI	lysine	-	nitrogen source
43727	25115 ChEBI	malate	+	carbon source
43727	25115 ChEBI	malate	+	nitrogen source
43727	17306 ChEBI	maltose	+	builds acid from
43727	17306 ChEBI	maltose	+	carbon source
43727	17306 ChEBI	maltose	+	nitrogen source
43727	28053 ChEBI	melibiose	-	builds acid from
43727	320061 ChEBI	methyl alpha-D-glucopyranoside	+	builds acid from
43727	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from
43727	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from
43727	17268 ChEBI	myo-inositol	-	builds acid from
43727	506227 ChEBI	N-acetylglucosamine	-	builds acid from
43727	506227 ChEBI	N-acetylglucosamine	-	carbon source
43727	506227 ChEBI	N-acetylglucosamine	-	nitrogen source
43727	17632 ChEBI	nitrate	+	reduction
43727	18401 ChEBI	phenylacetate	-	carbon source
43727	18401 ChEBI	phenylacetate	-	nitrogen source
43727	26271 ChEBI	proline	+	carbon source
43727	26271 ChEBI	proline	+	nitrogen source
43727	16634 ChEBI	raffinose	-	builds acid from
43727	16634 ChEBI	raffinose	+	carbon source
43727	16634 ChEBI	raffinose	+	nitrogen source
43727	15963 ChEBI	ribitol	-	builds acid from
43727	17814 ChEBI	salicin	+	builds acid from
43727	30911 ChEBI	sorbitol	-	builds acid from
43727	30911 ChEBI	sorbitol	-	carbon source
43727	30911 ChEBI	sorbitol	-	nitrogen source
43727	27922 ChEBI	sorbose	-	carbon source
43727	27922 ChEBI	sorbose	-	nitrogen source
43727	28017 ChEBI	starch	-	hydrolysis
43727	28017 ChEBI	starch	+	builds acid from
43727	28017 ChEBI	starch	+	carbon source
43727	28017 ChEBI	starch	+	nitrogen source
43727	17992 ChEBI	sucrose	+	builds acid from
43727	17992 ChEBI	sucrose	+	carbon source
43727	17992 ChEBI	sucrose	+	nitrogen source
43727	27082 ChEBI	trehalose	+	builds acid from
43727	27082 ChEBI	trehalose	+	carbon source
43727	27082 ChEBI	trehalose	+	nitrogen source
43727	32528 ChEBI	turanose	+	builds acid from
43727	53424 ChEBI	tween 20	+	hydrolysis
43727	53423 ChEBI	tween 40	+	hydrolysis
43727	53425 ChEBI	tween 60	+	hydrolysis
43727	53426 ChEBI	tween 80	+	hydrolysis
43727	17151 ChEBI	xylitol	-	builds acid from
43727	17151 ChEBI	xylitol	-	carbon source
43727	17151 ChEBI	xylitol	-	nitrogen source
43727	18222 ChEBI	xylose	-	builds acid from
43727	18222 ChEBI	xylose	-	carbon source
43727	18222 ChEBI	xylose	-	nitrogen source

Antibiotic resistance

@ref	ChEBI	Metabolite	Sensitivity conc.	Resistance conc.
43727	2637	amikacin	30 µg (disc)
43727	3515	cefuroxime	30 µg (disc)
43727	17698	chloramphenicol	30 µg (disc)
43727	100241	ciprofloxacin	5 µg (disc)
43727	48923	erythromycin	15 µg (disc)
43727	17833	gentamicin		10 µg (disc)
43727	100246	norfloxacin	10 µg (disc)
43727	28368	novobiocin	30 µg (disc)
43727	86455	optochin		5 µg (disc)
43727	7809	oxacillin		1 µg (disc)
43727	17334	penicillin	10 Unit (disc)
43727	8232	piperacillin	100 µg (disc)
43727	8309	polymyxin b		300 Unit (disc)
43727	9332	sulfamethoxazole		23.75 µg (disc)
43727	27902	tetracycline	30 µg (disc)
43727	45924	trimethoprim		1.25 µg (disc)
43727	28001	vancomycin	30 µg (disc)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
43727	16136 ChEBI	hydrogen sulfide
43727	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
43727	acid phosphatase	+	3.1.3.2
43727	alkaline phosphatase	+	3.1.3.1
43727	alpha-chymotrypsin	+	3.4.21.1
43727	alpha-galactosidase	-	3.2.1.22
43727	alpha-glucosidase	+	3.2.1.20
43727	alpha-mannosidase	-	3.2.1.24
43727	beta-D-fucosidase	-	3.2.1.38
43727	beta-galactosidase	-	3.2.1.23
43727	beta-glucosidase	+	3.2.1.21
43727	beta-glucuronidase	-	3.2.1.31
43727	catalase	+	1.11.1.6
43727	cystine arylamidase	+	3.4.11.3
43727	cytochrome oxidase	+	1.9.3.1
43727	esterase (C 4)	+
43727	esterase Lipase (C 8)	+
43727	leucine arylamidase	+	3.4.11.1
43727	lipase (C 14)	-
43727	N-acetyl-beta-glucosaminidase	-	3.2.1.52
43727	naphthol-AS-BI-phosphohydrolase	+
43727	trypsin	+	3.4.21.4
43727	valine arylamidase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)
#Host Body-Site	#Plant	#Sterilized plant part

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
24223	surface-sterilized root of Ocimum basilicum	Ocimum basilicum	Yunnan Province, Shilin County, Impression Tobacco farm (103° 21' 51.8'' E 24° 54' 43.6'' N)	China	CHN	Asia	24.9121	103.364 24.9121/103.364
43727	A root sample of Ocimum basilicum collected from Impression Tobacco farm		Shilin County, Yunnan Province	China	CHN	Asia	24.912	103.364 24.912/103.364
67770	Root of Ocimum basilicum from Impression Tobacco farm in Shilin City	Ocimum basilicum		China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence KP793091 (>99% sequence identity) for Mariniluteicoccus endophyticus subclade from Microbeatlas

Aquatic Samples	7
Soil Samples	5
Animal Samples	212
Plant Samples	5
Total Samples	229

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
24223	1	Risk group (German classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
24223	Mariniluteicoccus endophyticus strain YIM 2617 16S ribosomal RNA gene, partial sequence	KP793091	1508		1642469

GC content

@ref	GC-content (mol%)	Method
24223	66.6	high performance liquid chromatography (HPLC)
67770	66.4	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Biotechnological Potential of Bacteria Isolated from the Sea Cucumber Holothuria leucospilota and Stichopus vastus from Lampung, Indonesia.	Wibowo JT, Kellermann MY, Versluis D, Putra MY, Murniasih T, Mohr KI, Wink J, Engelmann M, Praditya DF, Steinmann E, Schupp PJ.	Mar Drugs	10.3390/md17110635	2019
Phylogeny	Desertihabitans aurantiacus gen. nov., sp. nov., a novel member of the family Propionibacteriaceae.	Sun Y, Wang H, Zhang T, Liu WH, Liu HY, Yu LY, Zhang YQ	Int J Syst Evol Microbiol	10.1099/ijsem.0.003519	2019
Phylogeny	Mariniluteicoccus endophyticus sp. nov., an endophytic actinobacterium isolated from root of Ocimum basilicum.	Liu BB, Chen W, Chu X, Yang Y, Salam N, Hu WY, Gao R, Duan YQ, Li WJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.000880	2016

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#24223	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28728
#43727	Bing-Bing Liu, Wei Chen, Xiao Chu, Ying Yang, Nimaichand Salam, Wei-Yao Hu, Rui Gao, Yan-Qing Duan, Wen-Jun Li: Mariniluteicoccus endophyticus sp. nov., an endophytic actinobacterium isolated from root of Ocimum basilicum. IJSEM 66: 1306 - 1310 2016 ( DOI 10.1099/ijsem.0.000880 , PubMed 26742722 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Mariniluteicoccus endophyticus (DSM 28728, JCM 30097, KCTC 29482)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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