Strain identifier

BacDive ID: 132415

Type strain: Yes

Species: Deferrisoma palaeochoriense

Strain Designation: MAG-PB1

Culture col. no.: DSM 29363, JCM 30394

Strain history: <- I. Pérez-Rodríguez, Carnegie Inst. of Washington, Geophysical Lab., USA; MAG-PB1 <- I. Pérez-Rodríguez {2013}

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Deferrisoma palaeochoriense MAG-PB1 is an obligate anaerobe, mixotroph, gram-negative bacterium that was isolated from shallow-water hydrothermal vent.

  1. gram-negative
  2. motile
  3. rod-shaped
  4. mixotroph
  5. obligate anaerobe
  6. 16S sequence
  7. Bacteria
  • Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental informationarrow_down
  • [Ref.: #24204] Sample type/isolated from shallow-water hydrothermal vent
    [Ref.: #24204] Geographic location (country and/or sea, region) Mediterranean Sea, Palaeochori Bay off the coast of the island of Milos
    [Ref.: #24204] Country Greece
    [Ref.: #24204] Country ISO 3 Code GRC
    [Ref.: #24204] Continent Europe
     
    [Ref.: #44025] Sample type/isolated from sediments of an active shallow-water vent
    [Ref.: #44025] Sampling date 2012-05
    [Ref.: #44025] Geographic location (country and/or sea, region) Palaeochori Bay, Milos
    [Ref.: #44025] Country Greece
    [Ref.: #44025] Country ISO 3 Code GRC
    [Ref.: #44025] Continent Europe
    [Ref.: #44025] Enrichment culture modified basal medium described by Slobodkina et al. 2009
    [Ref.: #44025] Enrichment culture composition KH2PO4 (0.33 g), (NH4)2SO4 (0.5 g), KCl (0.33 g), MgCl2 . 6H2O (4.0 g), CaCl2 . 2H2O (0.33 g), NaHCO3 (0.8 g), NaCl (18.0 g), 1 ml trace-element solution SL-10 (Sleat et al., 1984), 1 ml selenite-tungstate solution (Tschech & Schink, 1985) and 1 ml vitamin solution (Wolin et al., 1963). The pH of the medium was not adjusted and no reducing agent was added. Fe(III) was provided in the form of amorphous Fe(III) oxide (88 mmol/l), synthesized by titrating a solution of FeCl3 x 6H2O with NaOH (10 %,
    [Ref.: #44025] Isolation/enrichment procedure Upon arrival at the eld laboratory, samples were processed and stored at 4°C under a N2 (100%, v/v; 200 kPa) atmosphere. 10 consecutive series of dilutions at 50°C
    Isolation sources categories
    #Condition #Thermophilic (>45°C)    -   
    #Environmental #Terrestrial #Coast
    #Environmental #Aquatic #Hydrothermal vent
    #Environmental #Aquatic #Sediment
    * marker position based on {}

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