[Ref.: #24147] |
Sample type/isolated from |
freshwater lake sediment |
[Ref.: #24147] |
Geographic location (country and/or sea, region) |
Shiga, Lake Biwa, station A |
[Ref.: #24147] |
Country |
Japan |
[Ref.: #24147] |
Country ISO 3 Code |
JPN |
[Ref.: #24147] |
Continent |
Asia |
[Ref.: #24147] |
Geographic location |
35.3833°/136.1170° |
|
[Ref.: #65216] |
Sample type/isolated from |
sediment sample |
[Ref.: #65216] |
Sampling date |
2010-12 |
[Ref.: #65216] |
Geographic location (country and/or sea, region) |
cold anoxic hypolimnion of freshwater Lake Biwa |
[Ref.: #65216] |
Country |
Japan |
[Ref.: #65216] |
Country ISO 3 Code |
JPN |
[Ref.: #65216] |
Continent |
Asia |
[Ref.: #65216] |
Geographic location |
35.3833°/136.1170° |
[Ref.: #65216] |
Enrichment culture |
bicarbonate-buffered low-salt defined medium |
[Ref.: #65216] |
Enrichment culture composition |
(all l^-1): 0.2 g MgCl 2 .6H 2 O, 0.1 g CaCl 2 .2H 2 O, 0.1 g NH 4 Cl, 0.1 g KH 2 PO 4 , 0.1 g KCl, 1 ml trace element solution, 1 ml selenite-tungstate solution, 1 ml vitamin mixture solution, 1 ml vitamin B 12 solution, 1 ml thiamine solution, 30 ml NaHCO3 solution. Elemental sulfur (approximately 0.25 g l^-1) and sodium nitrate (20 mM). The headspace of the culture bottle was filled with N 2 /CO 2 (80 : 20, v/v). |
[Ref.: #65216] |
Enrichment culture temperature |
5 ̊C |
[Ref.: #65216] |
Isolation/enrichment procedure |
incubation in the dark |
* marker position based on {}
|
|
Isolation sources categories |
#Environmental |
#Aquatic |
#Freshwater |
#Environmental |
#Aquatic |
#Lake (large) |
#Environmental |
#Aquatic |
#Sediment |
|
|
-
Availability in culture collections External links
[Ref.: #24147] |
Culture collection no. |
DSM 100309, NBRC 110941 |
[Ref.: #90704] |
SI-ID 405628
|
* |
|
Literature: |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Phylogeny |
Sulfurirhabdus autotrophica gen. nov., sp. nov., isolated from a freshwater lake. |
Watanabe T, Kojima H, Shinohara A, Fukui M |
Int J Syst Evol Microbiol |
10.1099/ijsem.0.000679 |
2015 |
* |
|
- References
-
-
#24147 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 100309
|
-
-
-
#66794 |
Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg:
BRENDA, the ELIXIR core data resource in 2021: new developments and updates.
Nucleic Acids Res. 49:
D498 - D508
2020 (
DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
|
-
#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
|
-
-
-
#90704 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID405628.1 )
|
- * These data were automatically processed and therefore are not curated
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