Bifidobacterium hapali (DSM 100202, JCM 30799, MRM 8.14)

Name: Bifidobacterium hapali (DSM 100202, JCM 30799, MRM 8.14)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 132346

Type strain

Strain Designation MRM_8.14

Culture col. no. DSM 100202 JCM 30799 MRM 8.14 MRM_8.14

NCBI tax ID(s) 1630172

Special Collections DSMZ JCM Literature strains

History <- P. Mattarelli, Univ. Bologna, Italy; MRM_8.14 <- M. Modesto P. Mattarelli; Dept. of Agric. Sci., Bologna Univ., Italy; MRM_8.14.

Links

Bifidobacterium hapali MRM_8.14 is an aerobe, Gram-positive, rod-shaped prokaryote that forms circular colonies and was isolated from faeces of baby common marmosets .

Gram-positive rod-shaped colony-forming aerobe genome sequence 16S sequence

Name and taxonomic classification

SI-ID 401039

LMG 30650,JCM 30799,DSM 100202

@ref 20215

Last LPSN update 2026-02-09 11:31:41

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Bifidobacteriales

Family Bifidobacteriaceae

Genus Bifidobacterium

Species Bifidobacterium hapali

Full scientific name Bifidobacterium hapali Michelini et al. 2016

BacDive ID	Other strains from **Bifidobacterium hapali** (1)	Type strain
132347	B. hapali MRM_9.14, DSM 100218, JCM 30800, MRM 9.14

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
43839	positive	rod-shaped
125438			91.5
125439	positive		92

Colony morphology

@ref	Type of hemolysis	Colony size	Colony color	Colony shape	Incubation period	Medium used
43839	gamma	1.5-2.5 mm	White	circular	2 days	TPY agar plates

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
43839	TPY agar plates
24135	BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58)		Medium recipe at MediaDive	Name: BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58) Composition: Glucose 10.0 g/l Casein peptone 10.0 g/l Bacto Soytone 5.0 g/l Meat extract 5.0 g/l Yeast extract 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l MnSO4 x H2O 0.05 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Tween 80 Resazurin Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
24135	positive	growth	37	mesophilic
43839	positive	growth	25-42
43839	positive	optimum	37	mesophilic
67770	positive	growth	37	mesophilic

Culture pH

@ref	Ability	Type	PH
43839	positive	optimum	6.5
43839	positive	growth	4.5-7.5

Physiology and metabolism

Oxygen tolerance

43839

Oxygen toleranceaerobe

Spore formation

@ref	Spore formation	Confidence
125439		91.5

Murein

@ref	Murein short key	Type
24135	A11.11	A3alpha L-Lys(L-Orn)-L-Ala₂-L-Ser

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43839	16808 ChEBI	2-dehydro-D-gluconate	-	builds acid from
43839	58143 ChEBI	5-dehydro-D-gluconate	-	builds acid from
43839	27613 ChEBI	amygdalin	-	builds acid from
68371	27613 ChEBI	amygdalin	+	builds acid from	from API 50CH acid
43839	18305 ChEBI	arbutin	-	builds acid from
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
43839	17057 ChEBI	cellobiose	+	builds acid from
43839	17108 ChEBI	D-arabinose	-	builds acid from
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
43839	18333 ChEBI	D-arabitol	-	builds acid from
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
43839	15824 ChEBI	D-fructose	+	builds acid from
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
43839	28847 ChEBI	D-fucose	-	builds acid from
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
43839	12936 ChEBI	D-galactose	-	builds acid from
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
43839	17634 ChEBI	D-glucose	+	builds acid from
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
43839	62318 ChEBI	D-lyxose	-	builds acid from
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
43839	16899 ChEBI	D-mannitol	-	builds acid from
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
43839	16024 ChEBI	D-mannose	+	builds acid from
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
43839	16988 ChEBI	D-ribose	-	builds acid from
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
43839	17924 ChEBI	D-sorbitol	-	builds acid from
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
43839	16443 ChEBI	D-tagatose	-	builds acid from
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
43839	65327 ChEBI	D-xylose	+/-	builds acid from
68371	65327 ChEBI	D-xylose	+	builds acid from	from API 50CH acid
43839	17113 ChEBI	erythritol	-	builds acid from
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
43839	4853 ChEBI	esculin	+	hydrolysis
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
43839	16813 ChEBI	galactitol	-	builds acid from
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
43839	28066 ChEBI	gentiobiose	-	builds acid from
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
43839	24265 ChEBI	gluconate	-	builds acid from
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
43839	17754 ChEBI	glycerol	+	builds acid from
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
43839	28087 ChEBI	glycogen	-	builds acid from
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
43839	15443 ChEBI	inulin	-	builds acid from
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
43839	30849 ChEBI	L-arabinose	+	builds acid from
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
43839	18403 ChEBI	L-arabitol	-	builds acid from
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
43839	62345 ChEBI	L-rhamnose	-	builds acid from
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
43839	17266 ChEBI	L-sorbose	-	builds acid from
43839	65328 ChEBI	L-xylose	-	builds acid from
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
43839	17716 ChEBI	lactose	+	builds acid from
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
43839	17306 ChEBI	maltose	+	builds acid from
43839	6731 ChEBI	melezitose	+/-	builds acid from
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
43839	28053 ChEBI	melibiose	-	builds acid from
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
43839	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	+	builds acid from	from API 50CH acid
43839	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from
68371	43943 ChEBI	methyl alpha-D-mannoside	+	builds acid from	from API 50CH acid
43839	74863 ChEBI	methyl beta-D-xylopyranoside	+	builds acid from
68371	74863 ChEBI	methyl beta-D-xylopyranoside	+	builds acid from	from API 50CH acid
43839	17268 ChEBI	myo-inositol	-	builds acid from
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
43839	506227 ChEBI	N-acetylglucosamine	-	builds acid from
43839	17632 ChEBI	nitrate	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
43839	16634 ChEBI	raffinose	+	builds acid from
68371	16634 ChEBI	raffinose	+	builds acid from	from API 50CH acid
43839	15963 ChEBI	ribitol	-	builds acid from
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
43839	17814 ChEBI	salicin	+/-	builds acid from
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
43839	28017 ChEBI	starch	-	builds acid from
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
43839	17992 ChEBI	sucrose	+	builds acid from
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
43839	27082 ChEBI	trehalose	-	builds acid from
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
43839	32528 ChEBI	turanose	-	builds acid from
68371	32528 ChEBI	turanose	+	builds acid from	from API 50CH acid
43839	17151 ChEBI	xylitol	-	builds acid from
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
43839	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
43839	6-phospho-beta-galactosidase	-	3.2.1.85
43839	alanine arylamidase	+	3.4.11.2
43839	alkaline phosphatase	+	3.1.3.1
43839	alpha-arabinosidase	-	3.2.1.55
43839	alpha-chymotrypsin	-	3.4.21.1
43839	alpha-fucosidase	-	3.2.1.51
43839	alpha-galactosidase	-	3.2.1.22
43839	alpha-glucosidase	-	3.2.1.20
43839	arginine arylamidase	+
43839	arginine dihydrolase	+	3.5.3.6
43839	beta-galactosidase	-	3.2.1.23
43839	beta-glucosidase	-	3.2.1.21
43839	beta-glucuronidase	-	3.2.1.31
43839	catalase	-	1.11.1.6
43839	cystine arylamidase	-	3.4.11.3
43839	cytochrome oxidase	-	1.9.3.1
43839	glutamate decarboxylase	-	4.1.1.15
43839	glutamyl-glutamate arylamidase	+
43839	histidine arylamidase	+
43839	leucine arylamidase	+	3.4.11.1
43839	leucyl glycin arylamidase	+	3.4.11.1
43839	lipase (C 14)	-
43839	N-acetyl-beta-glucosaminidase	-	3.2.1.52
43839	phenylalanine arylamidase	+
43839	proline-arylamidase	+	3.4.11.5
43839	pyroglutamic acid arylamidase	+
43839	serine arylamidase	+
43839	tyrosine arylamidase	+
43839	urease	+	3.5.1.5
43839	valine arylamidase	-

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	adipate degradation	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	acetoin degradation	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	folate polyglutamylation	100	1 of 1
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	starch degradation	100	10 of 10
66794	peptidoglycan biosynthesis	93.33	14 of 15
66794	vitamin B1 metabolism	92.31	12 of 13
66794	pentose phosphate pathway	90.91	10 of 11
66794	threonine metabolism	90	9 of 10
66794	chorismate metabolism	88.89	8 of 9
66794	aspartate and asparagine metabolism	88.89	8 of 9
66794	palmitate biosynthesis	86.36	19 of 22
66794	glycogen metabolism	80	4 of 5
66794	cellulose degradation	80	4 of 5
66794	valine metabolism	77.78	7 of 9
66794	serine metabolism	77.78	7 of 9
66794	sulfopterin metabolism	75	3 of 4
66794	C4 and CAM-carbon fixation	75	6 of 8
66794	glycogen biosynthesis	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	NAD metabolism	72.22	13 of 18
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	photosynthesis	71.43	10 of 14
66794	phenylalanine metabolism	69.23	9 of 13
66794	purine metabolism	68.09	64 of 94
66794	glycolate and glyoxylate degradation	66.67	4 of 6
66794	CO2 fixation in Crenarchaeota	66.67	6 of 9
66794	flavin biosynthesis	66.67	10 of 15
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	octane oxidation	66.67	2 of 3
66794	formaldehyde oxidation	66.67	2 of 3
66794	methionine metabolism	65.38	17 of 26
66794	d-xylose degradation	63.64	7 of 11
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	isoleucine metabolism	62.5	5 of 8
66794	ketogluconate metabolism	62.5	5 of 8
66794	gluconeogenesis	62.5	5 of 8
66794	lipoate biosynthesis	60	3 of 5
66794	oxidative phosphorylation	59.34	54 of 91
66794	glycolysis	58.82	10 of 17
66794	pyrimidine metabolism	57.78	26 of 45
66794	ubiquinone biosynthesis	57.14	4 of 7
66794	glutamate and glutamine metabolism	57.14	16 of 28
66794	degradation of pentoses	57.14	16 of 28
66794	tetrahydrofolate metabolism	57.14	8 of 14
66794	d-mannose degradation	55.56	5 of 9
66794	histidine metabolism	55.17	16 of 29
66794	leucine metabolism	53.85	7 of 13
66794	non-pathway related	52.63	20 of 38
66794	cis-vaccenate biosynthesis	50	1 of 2
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	coenzyme A metabolism	50	2 of 4
66794	degradation of hexoses	50	9 of 18
66794	tryptophan metabolism	50	19 of 38
66794	CMP-KDO biosynthesis	50	2 of 4
66794	ribulose monophosphate pathway	50	1 of 2
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	ethanol fermentation	50	1 of 2
66794	Entner Doudoroff pathway	50	5 of 10
66794	citric acid cycle	50	7 of 14
66794	selenocysteine biosynthesis	50	3 of 6
66794	glutathione metabolism	50	7 of 14
66794	butanoate fermentation	50	2 of 4
66794	cysteine metabolism	50	9 of 18
66794	alanine metabolism	48.28	14 of 29
66794	arginine metabolism	45.83	11 of 24
66794	metabolism of disaccharids	45.45	5 of 11
66794	proline metabolism	45.45	5 of 11
66794	lipid metabolism	45.16	14 of 31
66794	tyrosine metabolism	42.86	6 of 14
66794	reductive acetyl coenzyme A pathway	42.86	3 of 7
66794	propanol degradation	42.86	3 of 7
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	lysine metabolism	40.48	17 of 42
66794	propionate fermentation	40	4 of 10
66794	factor 420 biosynthesis	40	2 of 5
66794	methylglyoxal degradation	40	2 of 5
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	isoprenoid biosynthesis	38.46	10 of 26
66794	vitamin B6 metabolism	36.36	4 of 11
66794	degradation of sugar acids	36	9 of 25
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	sulfoquinovose degradation	33.33	1 of 3
66794	cyanate degradation	33.33	1 of 3
66794	lipid A biosynthesis	33.33	3 of 9
66794	IAA biosynthesis	33.33	1 of 3
66794	molybdenum cofactor biosynthesis	33.33	3 of 9
66794	degradation of sugar alcohols	31.25	5 of 16
66794	urea cycle	30.77	4 of 13
66794	polyamine pathway	30.43	7 of 23
66794	glycine metabolism	30	3 of 10
66794	benzoyl-CoA degradation	28.57	2 of 7
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	lactate fermentation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	carnitine metabolism	25	2 of 8
66794	biotin biosynthesis	25	1 of 4
66794	sulfate reduction	23.08	3 of 13
66794	nitrate assimilation	22.22	2 of 9
66794	4-hydroxymandelate degradation	22.22	2 of 9

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
24135	-	-	-	-	+	-	+	-	-	+	+	+	+	+	+/-	-	-	-	-	-	+	+	+/-	+	-	+	+	+/-	+/-	+	+	+	-	-	-	+	-	-	-	+	+	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Primates
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
24135	faeces of baby common marmosets (Callithrix jacchus L.)	Callithrix jacchus	Verona	Italy	ITA	Europe
43839	The feaces of common marmosets (Callithrix jacchus L.)
67770	Feces of a common marmosets

Taxonmaps

69479

Global distribution of 16S sequence KP718961 (>99% sequence identity) for Bifidobacterium hapali subclade from Microbeatlas

Aquatic Samples	98
Soil Samples	73
Animal Samples	10181
Plant Samples	12
Total Samples	10364

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
24135	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM225975v1 assembly for Bifidobacterium hapali DSM 100202	contig	GCA_002259755	1630172.3	2791355243	1630172	63.32

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
24135	Bifidobacterium hapali strain MRM_8.14 16S ribosomal RNA gene, partial sequence	KP718961	1381		1630172

GC content

@ref	GC-content (mol%)	Method
43839	56.4
24135	56.4	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Bifidobacterium hapali DSM 100202
NCBI: GCA_002259755

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	91.50	no
125439	motility	BacteriaNetⓘ	no	89.30	no
125439	gram_stain	BacteriaNetⓘ	positive	92.00	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	84.50	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Bifidobacterium hapali strain DSM 100202
PATRIC: 1630172.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.50	no
125438	anaerobic	anaerobicⓘ	yes	61.18	yes
125438	spore-forming	spore-formingⓘ	no	87.36	no
125438	aerobic	aerobicⓘ	no	76.98	yes
125438	thermophilic	thermophileⓘ	no	91.46	no
125438	flagellated	motile2+ⓘ	no	91.50	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Comparative genomic and phylogenomic analyses of the Bifidobacteriaceae family.	Lugli GA, Milani C, Turroni F, Duranti S, Mancabelli L, Mangifesta M, Ferrario C, Modesto M, Mattarelli P, Jiri K, van Sinderen D, Ventura M.	BMC Genomics	10.1186/s12864-017-3955-4	2017
Genetics	Tracking the Taxonomy of the Genus Bifidobacterium Based on a Phylogenomic Approach.	Lugli GA, Milani C, Duranti S, Mancabelli L, Mangifesta M, Turroni F, Viappiani A, van Sinderen D, Ventura M.	Appl Environ Microbiol	10.1128/aem.02249-17	2018
Phylogeny	Phylogenetic classification of six novel species belonging to the genus Bifidobacterium comprising Bifidobacterium anseris sp. nov., Bifidobacterium criceti sp. nov., Bifidobacterium imperatoris sp. nov., Bifidobacterium italicum sp. nov., Bifidobacterium margollesii sp. nov. and Bifidobacterium parmae sp. nov.	Lugli GA, Mangifesta M, Duranti S, Anzalone R, Milani C, Mancabelli L, Alessandri G, Turroni F, Ossiprandi MC, van Sinderen D, Ventura M	Syst Appl Microbiol	10.1016/j.syapm.2018.01.002	2018
Phylogeny	Bifidobacterium myosotis sp. nov., Bifidobacterium tissieri sp. nov. and Bifidobacterium hapali sp. nov., isolated from faeces of baby common marmosets (Callithrix jacchus L.).	Michelini S, Oki K, Yanokura E, Shimakawa Y, Modesto M, Mattarelli P, Biavati B, Watanabe K	Int J Syst Evol Microbiol	10.1099/ijsem.0.000708	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#24135	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100202
#43839	Samanta Michelini, Kaihei Oki, Emiko Yanokura, Yasuhisa Shimakawa, Monica Modesto, Paola Mattarelli, Bruno Biavati, Koichi Watanabe: Bifidobacterium myosotis sp. nov., Bifidobacterium tissieri sp. nov. and Bifidobacterium hapali sp. nov., isolated from faeces of baby common marmosets (Callithrix jacchus L.). IJSEM 66: 255 - 265 2016 ( DOI 10.1099/ijsem.0.000708 , PubMed 26515885 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Bifidobacterium hapali (DSM 100202, JCM 30799, MRM 8.14)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Murein

Metabolite utilization

Metabolite production

Enzymes

Pathway annotation

API 50CHac

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_002259755

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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