Thermocrinis jamiesonii (DSM 27162, JCM 19133, GBS 1)

Name: Thermocrinis jamiesonii (DSM 27162, JCM 19133, GBS 1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 132294

Type strain

Culture col. no. DSM 27162 JCM 19133 GBS 1

NCBI tax ID(s) 1302351

Special Collections DSMZ JCM

History <- B. Hedlund, School Life Sci., Univ. Nevada, Las Vegas, USA; GBS1 <- J. Dodsworth J. Dodsworth and B. P. Hedlund GBS1.

Links

Thermocrinis jamiesonii DSM 27162 is a hyperthermophilic prokaryote that was isolated from water column of a geothermal spring.

hyperthermophilic genome sequence

Name and taxonomic classification

SI-ID 402933

JCM 19133,DSM 27162

@ref 20215

Last LPSN update 2025-12-16 10:01:28

Domain Pseudomonadati

Phylum Aquificota

Class Aquificia

Order Aquificales

Family Aquificaceae

Genus Thermocrinis

Species Thermocrinis jamiesonii

Full scientific name Thermocrinis jamiesonii Dodsworth et al. 2015

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	98.977

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
24083	GBS SALTS MODIFIED FOR THERMICRINIS JAMIESONII (DSMZ Medium 1486)		Medium recipe at MediaDive	Name: GBS salts modified for Thermocrinis jamiesonii (DSMZ Medium 1486) Composition: NaCl 3.0 g/l NaH2PO4 1.38 g/l Sodium thiosulfate pentahydrate 0.496372 g/l Na2SO4 0.3 g/l Sodium acetate trihydrate 0.27216 g/l KCl 0.15 g/l MgSO4 x 7 H2O 0.123 g/l NH4Cl 0.107 g/l Na2-EDTA 0.0185 g/l CaCl2 x 2 H2O 0.015 g/l FeSO4 x 7 H2O 0.0055 g/l MnCl2 x 4 H2O 0.000492 g/l H3BO3 0.000155 g/l ZnSO4 x 7 H2O 0.000144 g/l Na2MoO4 x 2 H2O 0.000121 g/l CoCl2 x 6 H2O 0.000119 g/l CuCl2 x 2 H2O 8.6e-05 g/l Sodium bicarbonate Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
24083	positive	growth	80	hyperthermophilic
67770	positive	growth	80	hyperthermophilic

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125438		94.764

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Thermal spring
#Condition	#Thermophilic (>45°C)	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
24083	water column of a geothermal spring	Nevada, near Gerlach, Great Boiling Spring, north side of the source pool, site A	USA	USA	North America
67770	Water column of Great Boiling Spring	NV	USA	USA	North America

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
24083	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM70242v1 assembly for Thermocrinis jamiesonii GBS1	scaffold	GCA_000702425	1313265.4	2562617198	1302351	73.26

GC content

@ref	GC-content (mol%)	Method
24083	41.3	sequence analysis
67770	41.3	genome sequence analysis

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Thermocrinis sp. GBS GBS
NCBI: GCA_000702425.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.98	no
125438	anaerobic	anaerobicⓘ	no	55.89	no
125438	aerobic	aerobicⓘ	no	73.80	no
125438	spore-forming	spore-formingⓘ	no	94.76	no
125438	thermophilic	thermophileⓘ	yes	75.06	yes
125438	flagellated	motile2+ⓘ	no	60.78	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1T Isolated from Great Boiling Spring, Nevada.	Ganji R, Murugapiran SK, Ong JC, Manoharan N, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TB, Ngan CY, Daum C, Duffy K, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Dodsworth JA, Hedlund BP	Genome Announc	10.1128/genomeA.01112-16	2016
Phylogeny	Thermocrinis jamiesonii sp. nov., a thiosulfate-oxidizing, autotropic thermophile isolated from a geothermal spring.	Dodsworth JA, Ong JC, Williams AJ, Dohnalkova AC, Hedlund BP	Int J Syst Evol Microbiol	10.1099/ijsem.0.000647	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#24083	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27162
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Thermocrinis jamiesonii (DSM 27162, JCM 19133, GBS 1)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000702425

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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