Name: Nonomuraea flavida YN-5-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132276

Type strain:

Species: Nonomuraea flavida

Strain Designation: YN-5-1

Culture col. no.: DSM 102297, CCTCC AB 2012909, KCTC 29143

Strain history: <- C Shaofeng, Xiamen Univ., China

NCBI tax ID(s): 1233677 (species)

SI-ID 396623

DSM 102297

Section

Nonomuraea flavida YN-5-1 is an aerobe, mesophilic bacterium that was isolated from rhizosphere soil of a medicinal plant, `Aconitum napellus`.

aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Streptosporangiaceae*
	Genus	*Nonomuraea*
	Species	**Nonomuraea flavida**
	Full Scientific Name (LPSN)	Nonomuraea flavida Chen et al. 2015

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24065]

Culture medium

N-Z-AMINE-MEDIUM (DSMZ Medium 554)

[Ref.: #24065]

Culture medium growth

[Ref.: #24065]

Culture medium link

Medium recipe at MediaDive

[Ref.: #24065]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24065]			growth	28 °C
[Ref.: #67771]			growth	28 °C

[Ref.: #24065]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67771]

Oxygen tolerance

aerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67771]	Sample type/isolated from	rhizosphere soil of a medicinal plant, `Aconitum napellus`
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia

[Ref.: #24065]	Sample type/isolated from	rhizosphere soil of a medicinal plant, Aconitum napellus
[Ref.: #24065]	Host species	Aconitum napellus
[Ref.: #24065]	Geographic location (country and/or sea, region)	Yunnan University Campus
[Ref.: #24065]	Country	China
[Ref.: #24065]	Country ISO 3 Code	CHN
[Ref.: #24065]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #24065]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24065]	Nonomuraea flavida strain YN-5-1 16S ribosomal RNA gene, partial sequence	JX467533	1451	ENA	1233677 tax ID

[Ref.: #24065]

GC-content

72.1 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #24065]

Culture collection no.

DSM 102297, CCTCC AB 2012909, KCTC 29143

[Ref.: #90623]

SI-ID 396623

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nonomuraea flavida sp. nov., a novel species of soil actinomycete isolated from Aconitum napellus rhizosphere.	Chen S, Shi J, Li D, Wu Y, Huang Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.000538	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24065

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102297

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#90623

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID396623.1 )

* These data were automatically processed and therefore are not curated

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