Name: Catellatospora tagetis NEAU-YJC4
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132269

Type strain:

Species: Catellatospora tagetis

Strain Designation: NEAU-YJC4

Culture col. no.: DSM 102129, CGMCC 4.7176, JCM 30053

Strain history: C. Liu; Northeast Agric. Univ., China; NEAU-YJC4.

NCBI tax ID(s): 1490215 (species)

SI-ID 401791

DSM 102129

Section

Catellatospora tagetis NEAU-YJC4 is a mesophilic bacterium that was isolated from Root of a marigold Tagetes erecta.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micromonosporales*
	Family	*Micromonosporaceae*
	Genus	*Catellatospora*
	Species	**Catellatospora tagetis**
	Full Scientific Name (LPSN)	Catellatospora tagetis Zhou et al. 2015

Information on morphological and physiological properties Morphology

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24058]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #24058]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

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Observation

quinones: MK-9(H₄), MK-8(H₆), MK-9(H₆)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24058]	Sample type/isolated from	Root of a marigold Tagetes erecta
[Ref.: #24058]	Host species	Tagetes erecta
[Ref.: #24058]	Geographic location (country and/or sea, region)	Heilongjiang Province
[Ref.: #24058]	Country	China
[Ref.: #24058]	Country ISO 3 Code	CHN
[Ref.: #24058]	Continent	Asia
[Ref.: #24058]	Geographic location	45.0500°/125.2170°

[Ref.: #67770]	Sample type/isolated from	Root of a marigold (Tagetes erecta L.) in Heilongjiang Province
[Ref.: #67770]	Host species	Tagetes erecta L.
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

What are isolation sources categories?

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Global distribution of 16S sequence KJ522750 (>99% sequence identity) for Catellatospora tagetis from Microbeatlas

Aquatic Samples	73
Soil Samples	369
Animal Samples	17
Plant Samples	86
Total Samples	545

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24058]	Catellatospora tagetis strain NEAU-YJC4 16S ribosomal RNA gene, partial sequence	KJ522750	1516	ENA	1490215 tax ID

[Ref.: #24058]	GC-content	71.1 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	70.8-71.4 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

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Culture collection no.

DSM 102129, CGMCC 4.7176, JCM 30053

[Ref.: #90616]

SI-ID 401791

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Catellatospora tagetis sp. nov., isolated from the root of a marigold (Tagetes erecta L.).	Zhou Y, Liu C, Zhang Y, Zhao J, Li C, He H, Li J, Wang X, Xiang W	Antonie Van Leeuwenhoek	10.1007/s10482-015-0511-6	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24058

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102129

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#90616

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID401791.1 )

* These data were automatically processed and therefore are not curated

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