Name: Salininema proteolyticum DSM 103380
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132265

Type strain:

Species: Salininema proteolyticum

Culture col. no.: DSM 103380, CCTCC AA 2013002, KACC 17683, NRRL B-24926, TRM 49201

Strain history: <- CCTCC; CCTCC AA2013002

NCBI tax ID(s): 1607685 (species)

SI-ID 407779

DSM 103380

Other strains from Salininema proteolyticum

S. proteolyticum Miq-4, LMG 28391, IBRC-M 10908 (type strain)

Section

Salininema proteolyticum DSM 103380 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from hypersaline soil.

Gram-positive
spore-forming
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Glycomycetales*
	Family	*Glycomycetaceae*
	Genus	*Salininema*
	Species	**Salininema proteolyticum**
	Full Scientific Name (LPSN)	Salininema proteolyticum Nikou et al. 2015

Synonym

Paraglycomyces xinjiangensis

Information on morphological and physiological properties Morphology

[Ref.: #43623]	Gram stain	positive

[Ref.: #43623]	Colony color	White
[Ref.: #43623]	Cultivation medium used	ISP3, ISP7

[Ref.: #43623]

Pigment production

Multimedia content

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Caption:

Medium 1159 37°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43623]

Culture medium

ISP3, ISP7

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Culture medium growth

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Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

		Temperature
[Ref.: #24054]	growth	37 °C
[Ref.: #43623]	growth	20-40 °C
[Ref.: #43623]	optimum	37 °C

[Ref.: #24054]	Temperature range	mesophilic
[Ref.: #43623]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43623]			optimum	8
[Ref.: #43623]			growth	7-9

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43623]

Oxygen tolerance

aerobe

[Ref.: #43623]	Spore description	spherical sporangia containing several spherical spores develop at mycelial aggregations
[Ref.: #43623]	Type of spore	spore
[Ref.: #43623]	Ability of spore formation	yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43623]		NaCl		growth	3-15	%
[Ref.: #43623]		NaCl		optimum	8-13	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43623]	arabinose ChEBI	+	carbon source
[Ref.: #43623]	cellulose ChEBI	-	hydrolysis
[Ref.: #43623]	D-fructose ChEBI	+	carbon source
[Ref.: #43623]	galactose ChEBI	+	carbon source
[Ref.: #43623]	gelatin ChEBI	+	hydrolysis
[Ref.: #43623]	glucose ChEBI	+	carbon source
[Ref.: #43623]	L-rhamnose ChEBI	-	carbon source
[Ref.: #43623]	lactose ChEBI	+	carbon source
[Ref.: #43623]	maltose ChEBI	+	carbon source
[Ref.: #43623]	mannitol ChEBI	+	carbon source
[Ref.: #43623]	myo-inositol ChEBI	+	carbon source
[Ref.: #43623]	nitrate ChEBI	+	reduction
[Ref.: #43623]	raffinose ChEBI	+	carbon source
[Ref.: #43623]	ribose ChEBI	+	carbon source
[Ref.: #43623]	sorbitol ChEBI	+	carbon source
[Ref.: #43623]	starch ChEBI	+	hydrolysis
[Ref.: #43623]	xylose ChEBI	-	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #43623]		hydrogen sulfide ChEBI	no
[Ref.: #43623]		melanin ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #43623]	catalase	+	1.11.1.6
[Ref.: #43623]	cytochrome oxidase	+	1.9.3.1
[Ref.: #43623]	urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24054]	Sample type/isolated from	hypersaline soil
[Ref.: #24054]	Geographic location (country and/or sea, region)	Lop Nur salt lake, Xinjiang Province
[Ref.: #24054]	Country	China
[Ref.: #24054]	Country ISO 3 Code	CHN
[Ref.: #24054]	Continent	Asia
[Ref.: #24054]	Geographic location	39.5833°/89.7667°

[Ref.: #43623]	Sample type/isolated from	a hypersaline soil sample collected from the Lop Nur salt lake
[Ref.: #43623]	Geographic location (country and/or sea, region)	Xinjiang Province
[Ref.: #43623]	Country	China
[Ref.: #43623]	Country ISO 3 Code	CHN
[Ref.: #43623]	Continent	Asia
[Ref.: #43623]	Geographic location	39.5830°/89.7660°
* marker position based on {}

Isolation sources categories

#Condition	#Saline	-
#Environmental	#Aquatic	#Lake (large)
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

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Global distribution of 16S sequence AB857719 (>99% sequence identity) for Salininema proteolyticum subclade from Microbeatlas

Aquatic Samples	25
Soil Samples	52
Animal Samples	278
Plant Samples	2
Total Samples	357

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24054]	Salininema proteolyticum gene for 16S ribosomal RNA, partial sequence	AB857719	1482	ENA	1607685 tax ID

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GC-content

70 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

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Culture collection no.

DSM 103380, CCTCC AA 2013002, KACC 17683, NRRL B-24926, TRM 49201

[Ref.: #90613]

SI-ID 407779

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Description of Salilacibacter albus gen. nov., sp. nov., isolated from a dried salt lake, and reclassification of Paraglycomyces xinjiangensis Luo et al. 2015 as a later heterotypic synonym of Salininema proteolyticum Nikou et al. 2015 with emended descriptions of the genus Salininema and Salininema proteolyticum.	Li XJ, Liu JM, Wu Y, Zhang WM, Li J, Liu SW, Wu G, Hu L, Chen L, Huang DL, Li RF, Sun CH	Int J Syst Evol Microbiol	10.1099/ijsem.0.001093	2016	*
Phylogeny	Paraglycomyces xinjiangensis gen. nov., sp. nov., a halophilic actinomycete.	Luo XX, Han XX, Zhang F, Wan CX, Zhang LL	Int J Syst Evol Microbiol	10.1099/ijsem.0.000571	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24054

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 103380

#43623

Xiao-Jun Li, Jia-Meng Liu, Yue Wu, Wei-Ming Zhang, Jing Li, Shao-Wei Liu, Gang Wu, Lin Hu, Li Chen, Da-Lin Huang, Rong-Feng Li, Cheng-Hang Sun: Description of Salilacibacter albus gen. nov., sp. nov., isolated from a dried salt lake, and reclassification of Paraglycomyces xinjiangensis Luo et al. 2015 as a later heterotypic synonym of Salininema proteolyticum Nikou et al. 2015 with emended descriptions of the genus Salininema and Salininema proteolyticum. IJSEM 66: 2558 - 2565 2016 ( DOI 10.1099/ijsem.0.001093 , PubMed 27088835 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#90613

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID407779.1 )

* These data were automatically processed and therefore are not curated

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