Name: Microbacterium hydrothermale 0704C9-2
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132181

Type strain:

Species: Microbacterium hydrothermale

Strain Designation: 0704C9-2

Culture col. no.: DSM 103239, CGMCC 1.12512, LMG 27542

Strain history: <- BCCM/LMG, University of Gent, Belgium; LMG 27542 <- G. Zhang, Key Laboratory of Marine Biogenetic Resources, Xiamen, PR China; 0704C9-2

NCBI tax ID(s): 857427 (species)

SI-ID 387987

LMG 27542, CGMCC 1.12512, DSM 103239

Section

Microbacterium hydrothermale 0704C9-2 is a mesophilic bacterium that was isolated from hydrothermal sediment, Indian Ocean depth 2943 m .

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Microbacterium*
	Species	**Microbacterium hydrothermale**
	Full Scientific Name (LPSN)	Microbacterium hydrothermale Zhang et al. 2014

Information on culture and growth conditions Culture and growth conditions

[Ref.: #23970]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #23970]

Culture medium growth

[Ref.: #23970]

Culture medium link

Medium recipe at MediaDive

[Ref.: #23970]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #23970]			growth	28 °C

[Ref.: #23970]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23970]	Sample type/isolated from	hydrothermal sediment, Indian Ocean depth 2943 m (High Seas)
[Ref.: #23970]	Geographic location (country and/or sea, region)	Latitude 27° 50.99' S, Longitude 63° 56.12' E
[Ref.: #23970]	Country	Indian Ocean
[Ref.: #23970]	Geographic location	-27.8500°/63.9333°
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #23970]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #23970]	Microbacterium hydrothermale strain 0704C9-2 16S ribosomal RNA gene, partial sequence	HM222660	1479	ENA	857427 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Microbacterium hydrothermale CGMCC 1.12512	2721755905	draft	JGI IMG/M	857427 tax ID	*
[Ref.: #66792]	Microbacterium hydrothermale CGMCC 1.12512	GCA_025960885	contig	GenBank	857427 tax ID	*

Availability in culture collections External links

[Ref.: #23970]

Culture collection no.

DSM 103239, CGMCC 1.12512, LMG 27542

[Ref.: #90536]

SI-ID 387987

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Microbacterium hydrothermale sp. nov., an actinobacterium isolated from hydrothermal sediment.	Zhang Y, Ren H, Zhang G	Int J Syst Evol Microbiol	10.1099/ijs.0.061697-0	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23970

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 103239

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#90536

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID387987.1 )

* These data were automatically processed and therefore are not curated

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