Vibrio sinaloensis (DSM 101073, T47)

Name: Vibrio sinaloensis (DSM 101073, T47)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 132092

Type strain

Strain Designation T47

Culture col. no. DSM 101073 T47

NCBI tax ID(s) 379097

Special Collections DSMZ

History <- N. I. Mohamad, Microbiome Laboratory, University of Malaya, Malaysia; T47

Links

Vibrio sinaloensis T47 is a bacterium that was isolated from sea water collected 20 cm below water surface.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 403719

DSM 101073

@ref 20215

Last LPSN update 2026-02-09 11:31:37

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order "Vibrionales"

Family Vibrionaceae

Genus Vibrio

Species Vibrio sinaloensis

Full scientific name Vibrio sinaloensis Gomez-Gil et al. 2008

BacDive ID	Other strains from **Vibrio sinaloensis** (3)	Type strain
17274	V. sinaloensis DSM 21333, CAIM 797, CECT 7298 (type strain)
17273	V. sinaloensis DSM 21327, CAIM 695
17345	V. sinaloensis DSM 21326, CAIM 648

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125438		90.891
125438		100	negative

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
23882	MARINE BROTH (ROTH CP73) (DSMZ Medium 514f)		Medium recipe at MediaDive	Name: MARINE BROTH (ROTH CP73) (DSMZ Medium 514f) Composition: NaCl 19.4 g/l Agar 15.0 g/l MgCl2 8.8 g/l Peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
23882	positive	growth	28

Physiology and metabolism

Compound production

23882

CompoundN acyl homoserine lactones

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
23882	sea water collected 20 cm below water surface	Selangor, Morib Beach	Malaysia	MYS	Asia	2.75	101.45 2.75/101.45

Interaction and safety

Risk assessment

@ref	Pathogenicity animal	Biosafety level	Biosafety level comment
23882	yes, in single cases	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM81647v1 assembly for Vibrio sinaloensis T47	contig	GCA_000816475	142461.5	2984110511	379097	63.45

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
23882	Vibrio sinaloensis strain T47 16S ribosomal RNA gene, partial sequence	KR058860	1444		379097

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Vibrio sinaloensis T47
NCBI: GCA_000816475.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	100.00	no
125438	anaerobic	anaerobicⓘ	no	95.58	no
125438	aerobic	aerobicⓘ	no	64.78	no
125438	spore-forming	spore-formingⓘ	no	87.51	no
125438	thermophilic	thermophileⓘ	no	98.88	yes
125438	flagellated	motile2+ⓘ	yes	90.89	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#23882	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 101073
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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