Name: Bosea sp. Leaf344
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132078

Type strain:

Species: Bosea sp.

Strain Designation: Leaf344

Culture col. no.: DSM 102578

Strain history: <- J. A. Vorholt, Institute of Microbiology, ETH Zurich, Switzerland; Leaf344 <- D. B. Müller, E. Potthoff and M. Remus-Emsermann

NCBI tax ID(s): 1871050 (species)

SI-ID 405073

DSM 102578

Other strains from Bosea sp.

B. sp. bKB13, DSM 13282
B. sp. plancto 3, DSM 13283
B. sp. Plancto 5, DSM 13284
B. sp. CRIB-07, DSM 18160, CIP 108888
B. sp. CRIB-12, DSM 18161
B. sp. CRIB-13, DSM 18163
B. sp. CRIB-10, DSM 18164
B. sp. CT5, DSM 13829
B. sp. Root381, DSM 102381
B. sp. Root483D1, DSM 102382
B. sp. Root670, DSM 102383
B. sp. WAO, DSM 102914
B. sp. JCM 28685
B. sp. JCM 28691
B. sp. JCM 28714
B. sp. JCM 28717
B. sp. JCM 28725

Section

Bosea sp. Leaf344 is a mesophilic bacterium that was isolated from leaf of Arabidopsis thaliana, wild-type genotype.

mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Boseaceae*
	Genus	*Bosea*
	Full Scientific Name (LPSN)	Bosea Das et al. 1996

Information on culture and growth conditions Culture and growth conditions

[Ref.: #23869]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #23869]

Culture medium growth

[Ref.: #23869]

Culture medium link

Medium recipe at MediaDive

[Ref.: #23869]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #23869]			growth	28 °C

[Ref.: #23869]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	+	reduction	* from API 20NE
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]	urea ChEBI	+	hydrolysis	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #68369]	beta-glucosidase	+	3.2.1.21	* from API 20NE
[Ref.: #68369]	cytochrome oxidase	+	1.9.3.1	* from API 20NE
[Ref.: #68369]	gelatinase	-		* from API 20NE
[Ref.: #68369]	urease	+	3.5.1.5	* from API 20NE

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #23869]	25162	+	-	-	-	+	+	-	-	+	-	+/-	-	-	-	-	-	+/-	+/-	-	-	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23869]	Sample type/isolated from	leaf of Arabidopsis thaliana, wild-type genotype
[Ref.: #23869]	Host species	Arabidopsis thaliana
[Ref.: #23869]	Geographic location (country and/or sea, region)	Brugg (47.4816806N 8.217547222E)
[Ref.: #23869]	Country	Switzerland
[Ref.: #23869]	Country ISO 3 Code	CHE
[Ref.: #23869]	Continent	Europe
[Ref.: #23869]	Geographic location	47.4817°/8.2176°
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Leaf (Phyllosphere)

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bosea sp. Leaf344	1736346.3	wgs	PATRIC	1736346 tax ID	*
[Ref.: #66792]	Bosea sp. Leaf344	2643221958	draft	JGI IMG/M	1736346 tax ID	*
[Ref.: #66792]	Bosea sp. Leaf344	GCA_001426225	scaffold	GenBank	1736346 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bosea sp. Leaf344 Leaf344 NCBI: GCA_001426225.1
[Ref.: #69480]	flagellated	no	60.133	no
[Ref.: #69480]	gram-positive	no	98.42	no
[Ref.: #69480]	anaerobic	no	97.332	no
[Ref.: #69480]	aerobic	yes	92.82	no
[Ref.: #69480]	halophile	no	95.389	no
[Ref.: #69480]	spore-forming	no	95.642	no
[Ref.: #69480]	thermophile	no	91.572	yes
[Ref.: #69480]	glucose-util	yes	93.374	yes
[Ref.: #69480]	motile	yes	85.54	no
[Ref.: #69480]	glucose-ferment	no	93.37	yes

Availability in culture collections External links

[Ref.: #23869]

Culture collection no.

DSM 102578

[Ref.: #90436]

SI-ID 405073

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23869

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102578

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68369

Automatically annotated from API 20NE .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#90436

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405073.1 )

* These data were automatically processed and therefore are not curated

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Bosea sp. Leaf344 Leaf344

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