Name: Xanthomonas massiliensis DSM 100900
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132046

Type strain:

Species: Xanthomonas massiliensis

Culture col. no.: DSM 100900, SN 8

Strain history: <- S. Khelaifia, Timone Hospital, Marseille, France; SN6 <- Unité de Recherche sur les Maladies Infectieuses et Tropicales Émergentes, Marseille

NCBI tax ID(s): 1720302 (species)

Section

Xanthomonas massiliensis DSM 100900 is a mesophilic bacterium that was isolated from human stool.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Lysobacterales*
	Family	*Lysobacteraceae*
	Genus	*Xanthomonas*
	Species	"Xanthomonas massiliensis"
	Full Scientific Name (LPSN)	Xanthomonas massiliensis Ndongo et al. 2017

Information on culture and growth conditions Culture and growth conditions

[Ref.: #23837]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #23837]

Culture medium growth

[Ref.: #23837]

Culture medium link

Medium recipe at MediaDive

[Ref.: #23837]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #23837]			growth	37 °C

[Ref.: #23837]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23837]	Sample type/isolated from	human stool
[Ref.: #23837]	Geographic location (country and/or sea, region)	Marseille
[Ref.: #23837]	Country	France
[Ref.: #23837]	Country ISO 3 Code	FRA
[Ref.: #23837]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Host	#Human	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LN881611 (>99% sequence identity) for Xanthomonas massiliensis from Microbeatlas

Aquatic Samples	180
Soil Samples	249
Animal Samples	1016
Plant Samples	129
Total Samples	1574

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #23837]	Xanthomonas sp. SN6 partial 16S rRNA gene, strain SN6	LN881611	1508	ENA	1720302 tax ID

Availability in culture collections External links

[Ref.: #23837]

Culture collection no.

DSM 100900, SN 8

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	'Actinomyces provencensis' sp. nov., 'Corynebacterium bouchesdurhonense' sp. nov., 'Corynebacterium provencense' sp. nov. and 'Xanthomonas massiliensis' sp. nov., 4 new species isolated from fresh stools of obese French patients.	Ndongo S, Andrieu C, Fournier PE, Lagier JC, Raoult D	New Microbes New Infect	10.1016/j.nmni.2017.01.013	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23837

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100900

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Xanthomonas massiliensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF