Name: unclassified bacterium DSM 102883
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132035

Type strain:

Species: unclassified bacterium

Culture col. no.: DSM 102883, CSUR P2434, Marseille-2434

Strain history: <- F. Cadoret, Timone Hospital, Marseille, France; Marseille-2434 <- Unité de Recherche sur les Maladies Infectieuses et Tropicales Émergentes

NCBI tax ID(s): 1869227 (species)

Other strains from unclassified bacterium

u. bacterium OL, DSM 104464, VKM B-3021 (type strain)
u. bacterium CreDm1, DSM 6526
u. bacterium LD64, DSM 11001
u. bacterium DSM 4029, ATCC 29733, VPI C48-50
u. bacterium SIO, DSM 2170, ATCC 19263, CCM ...
u. bacterium 008-523, DSM 3039
u. bacterium B6, DSM 3644
u. bacterium Re10, DSM 4661
u. bacterium Wo021, DSM 5672
u. bacterium KN032, DSM 5673
u. bacterium US2, DSM 5848
u. bacterium PHB, DSM 6754
u. bacterium FlGlyM, DSM 6945
u. bacterium 16AV, DSM 8385
u. bacterium DMA, DSM 8827
u. bacterium Ia3, DSM 10066
u. bacterium LFR, DSM 10174, ATCC 51258
u. bacterium 19gly3, DSM 11262
u. bacterium RZLAS, DSM 11480
u. bacterium DSM 11764, MUA MuA21, MUA 21
u. bacterium mXyS1, DSM 12567
u. bacterium PB90-2, DSM 12558
u. bacterium XB90, DSM 12595
u. bacterium 72Chol, DSM 12783
u. bacterium 4AA7, DSM 13636
u. bacterium NapHS2, DSM 14454
u. bacterium EbS7, DSM 15769
u. bacterium MLMS-1, DSM 17814
u. bacterium 95, DSM 30001, ATCC 19103, IAM ...
u. bacterium EL-44, DSM 11444
u. bacterium EL-182, DSM 12549
u. bacterium agV6, DSM 13281
u. bacterium AZD10A1, DSM 17878, CCUG 52015
u. bacterium AP57, DSM 18372, CECT 7177
u. bacterium CH 1359, DSM 12902
u. bacterium DSM 14861, HEL Hel43, HEL 43
u. bacterium JWIYJL-CPRB 1, JW/YJL-CPRB1, DSM ...
u. bacterium G.Slu-02, DSM 21096
u. bacterium L-1031, DSM 22395
u. bacterium CHL6 7, DSM 10147
u. bacterium CHL6 8, DSM 10148
u. bacterium DSM 17195, Jamm 0065
u. bacterium FSW06-301, DSM 27188
u. bacterium CL-2, DSM 28716, CSUR P1230
u. bacterium SB2, DSM 100743, CSUR P1926
u. bacterium P2414, DSM 102218, CSUR P2414
u. bacterium LC8, DSM 103728
u. bacterium DSM 53758, CB Cb502, CB 502
u. bacterium FGR15-07, DSM 26766, KACC 15970
u. bacterium DSM 27371, WR 21
u. bacterium UV 2.5, DSM 100784
u. bacterium 2-bin, DSM 105719, KCTC 32235, ...
u. bacterium S15, CCUG 68986, DSM 105791, CIP ...
u. bacterium RS22 G, DSM 23554
u. bacterium HV4-6-A5C, DSM 104144
u. bacterium HV4-5-B5C, DSM 104463
u. bacterium Melo94, DSM 105095
u. bacterium f-CSY, f_CSY, DSM 107475
u. bacterium f-RGN, f_RGN, DSM 107527
u. bacterium f-CXY, f_CXY, DSM 107528
u. bacterium APC924/74, DSM 108024
u. bacterium H2-39, H2_39, DSM 108347
u. bacterium 639, DSM 10557, IFAM 3594
u. bacterium DSM 23666, CAT 12a
u. bacterium B1107, A0630, DSM 24543, CGMCC ...
u. bacterium AO627, B1132, DSM 24544, CGMCC ...
u. bacterium GH-B6, DSM 24633
u. bacterium HV4-5-C5C, DSM 103941
u. bacterium H3_16, DSM 108225
u. bacterium 6/3/54 A FAA, DSM 24432
u. bacterium IFRC300, DSM 24590
u. bacterium KNH, DSM 24760
u. bacterium CP 19, DSM 24779
u. bacterium NYFB, DSM 25439
u. bacterium M3/9, DSM 100058
u. bacterium D16, 4/1/38B, DSM 27791, BEI HM-79
u. bacterium 7D4C2, DSM 110548
u. bacterium NM08_P-01, NM08, P-01, DSM 110563

Section

unclassified bacterium DSM 102883 is a mesophilic bacterium that was isolated from Stool sample from patient of Timone Hospital.

mesophilic
16S sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

[Ref.: #23826]	Domain	Bacteria
[Ref.: #23826]	Phylum	Firmicutes
[Ref.: #23826]	Class	Clostridia
[Ref.: #23826]	Order	Clostridiales
[Ref.: #23826]	Family	Clostridiaceae
[Ref.: #23826]	Genus	unclassified
[Ref.: #23826]	Species	unclassified bacterium
[Ref.: #23826]	Full Scientific Name	unclassified bacterium

Information on culture and growth conditions Culture and growth conditions

[Ref.: #23826]

Culture medium

CMC MEDIUM (N2/CO2) (DSMZ Medium 110a)

[Ref.: #23826]

Culture medium growth

[Ref.: #23826]

Culture medium link

Medium recipe at MediaDive

[Ref.: #23826]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #23826]			growth	37 °C

[Ref.: #23826]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23826]	Sample type/isolated from	Stool sample from patient of Timone Hospital
[Ref.: #23826]	Geographic location (country and/or sea, region)	Marseille
[Ref.: #23826]	Country	France
[Ref.: #23826]	Country ISO 3 Code	FRA
[Ref.: #23826]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Infection	#Medical environment	#Clinic
#Infection	#Patient	-
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LT161897 (>99% sequence identity) for Clostridium mediterraneense subclade from Microbeatlas

Aquatic Samples	3471
Soil Samples	577
Animal Samples	10135
Plant Samples	159
Total Samples	14342

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #23826]	Clostridium sp. Marseille-P2434T partial 16S rRNA gene, type strain Marseille-P2434T	LT161897	1477	ENA	1805472 tax ID

Availability in culture collections External links

[Ref.: #23826]

Culture collection no.

DSM 102883, CSUR P2434, Marseille-2434

Literature:

	Title	Authors	Journal	DOI	Year
	'Clostridium mediterraneense,' a new bacterial species isolated from the human gut.	Ndongo S, Cassir N, Delerce J, Raoult D, La Scola B	New Microbes New Infect	10.1016/j.nmni.2017.09.001	2017	*

References

#23826

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102883

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species unclassified bacterium in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF