Name: Clostridium nigeriense P2414
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132029

Type strain:

Species: Clostridium nigeriense

Strain Designation: P2414

Culture col. no.: DSM 102218, CSUR P2414

Strain history: <- F. Cadoret, Timone Hospital, Marseille, France; P2414 <- Unité de Recherche sur les Maladies Infectieuses et Tropicales Émergentes {2016}

NCBI tax ID(s): 1869227 (species)

Section

Clostridium nigeriense P2414 is a mesophilic bacterium that was isolated from Stool sample from child patient of Timone Hospital.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	*Clostridium*
	Species	"Clostridium nigeriense"
	Full Scientific Name (LPSN)	Clostridium nigeriense Alou et al. 2018

Information on culture and growth conditions Culture and growth conditions

[Ref.: #23820]

Culture medium

CMC MEDIUM (N2/CO2) (DSMZ Medium 110a)

[Ref.: #23820]

Culture medium growth

[Ref.: #23820]

Culture medium link

Medium recipe at MediaDive

[Ref.: #23820]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #23820]			growth	37 °C

[Ref.: #23820]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23820]	Sample type/isolated from	Stool sample from child patient of Timone Hospital
[Ref.: #23820]	Geographic location (country and/or sea, region)	Marseille
[Ref.: #23820]	Country	France
[Ref.: #23820]	Country ISO 3 Code	FRA
[Ref.: #23820]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Infection	#Medical environment	#Clinic
#Infection	#Patient	-
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Host	#Human	#Child

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LT161894 (>99% sequence identity) for Clostridium nigeriense from Microbeatlas

Aquatic Samples	594
Soil Samples	424
Animal Samples	5764
Plant Samples	66
Total Samples	6848

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #23820]	Clostridium sp. Marseille-P2414T partial 16S rRNA gene, type strain Marseille-P2414T	LT161894	1479	ENA	1805470 tax ID

Availability in culture collections External links

[Ref.: #23820]

Culture collection no.

DSM 102218, CSUR P2414

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23820

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102218

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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