Strain identifier

BacDive ID: 13183

Type strain: Yes

Species: Pseudomonas toyotomiensis

Strain Designation: HT-3

Culture col. no.: DSM 26169, JCM 15604, NCIMB 14511

Strain history: I. Yumoto HT-3.

NCBI tax ID(s): 554344 (species)

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Pseudomonas toyotomiensis HT-3 is a mesophilic bacterium that was isolated from soil immersed in hot-spring water containing hydrocarbons.

  1. mesophilic
  2. 16S sequence
  3. Bacteria
  4. genome sequence
  • Availability in culture collections External linksarrow_down
  • [Ref.: #18176] Culture collection no. DSM 26169, JCM 15604, NCIMB 14511
    [Ref.: #20218] Associated Passport(s) in StrainInfo 865840, 866724
    Literature: Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries.
    Titlearrow to sort Authorsarrow to sort Journalarrow to sort DOIarrow to sort Yeararrow to sort Mesharrow to sort Topicarrow to sort Topic2arrow to sort
    Pseudomonas toyotomiensis sp. nov., a psychrotolerant facultative alkaliphile that utilizes hydrocarbons. Hirota K, Yamahira K, Nakajima K, Nodasaka Y, Okuyama H, Yumoto I Int J Syst Evol Microbiol 10.1099/ijs.0.024612-0 2010 Alkalies/*metabolism, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Geologic Sediments/*microbiology, Hot Springs/*microbiology, Hydrocarbons/*metabolism, Molecular Sequence Data, Phylogeny, Pseudomonas/*classification/genetics/*isolation & purification/metabolism, RNA, Ribosomal, 16S/genetics Phylogeny Metabolism *
    Pseudomonas sagittaria sp. nov., a siderophore-producing bacterium isolated from oil-contaminated soil. Lin SY, Hameed A, Liu YC, Hsu YH, Lai WA, Chen WM, Shen FT, Young CC Int J Syst Evol Microbiol 10.1099/ijs.0.045567-0 2012 Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/analysis, Molecular Sequence Data, Nucleic Acid Hybridization, *Petroleum Pollution, Phospholipids/analysis, *Phylogeny, Pseudomonas/*classification/genetics/isolation & purification, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Soil Pollutants, Taiwan, Ubiquinone/analysis Phylogeny Genetics *
    Pseudomonas guguanensis sp. nov., a gammaproteobacterium isolated from a hot spring. Liu YC, Young LS, Lin SY, Hameed A, Hsu YH, Lai WA, Shen FT, Young CC Int J Syst Evol Microbiol 10.1099/ijs.0.047712-0 2013 Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial, Hot Springs/*microbiology, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, Pseudomonas/*classification/genetics/isolation & purification, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Taiwan, Ubiquinone/chemistry Phylogeny Genetics *
    Pseudomonas chengduensis sp. nov., isolated from landfill leachate. Tao Y, Zhou Y, He X, Hu X, Li D Int J Syst Evol Microbiol 10.1099/ijs.0.050294-0 2013 Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial, Molecular Sequence Data, Nucleic Acid Hybridization, *Phylogeny, Pseudomonas/*classification/genetics/isolation & purification, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Solid Waste, Ubiquinone/chemistry, Waste Disposal Facilities, Water Microbiology, Water Pollutants, Chemical/*analysis Phylogeny Genetics *
    Pseudomonas zhaodongensis sp. nov., isolated from saline and alkaline soils. Zhang L, Pan Y, Wang K, Zhang X, Zhang C, Zhang S, Fu X, Jiang J Int J Syst Evol Microbiol 10.1099/ijs.0.000057 2015 Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial, Hydrogen-Ion Concentration, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Pigmentation, Pseudomonas/*classification/genetics/isolation & purification, RNA, Ribosomal, 16S/genetics, Salinity, Sequence Analysis, DNA, Soil/chemistry, *Soil Microbiology, Ubiquinone/chemistry Phylogeny Genetics *
    Pseudomonas fluvialis sp. nov., a novel member of the genus Pseudomonas isolated from the river Ganges, India. Sudan SK, Pal D, Bisht B, Kumar N, Chaudhry V, Patil P, Sahni G, Mayilraj S, Krishnamurthi S Int J Syst Evol Microbiol 10.1099/ijsem.0.002520 2017 Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial, India, Nucleic Acid Hybridization, *Phylogeny, Pigmentation, Pseudomonas/*classification/genetics/isolation & purification, RNA, Ribosomal, 16S/genetics, Rivers/*microbiology, Sequence Analysis, DNA, *Water Microbiology Phylogeny Transcriptome *
    Taxonomic description and draft genome of Pseudomonas sediminis sp. nov., isolated from the rhizospheric sediment of Phragmites karka. Behera P, Mahapatra M, Seuylemezian A, Vaishampayan P, Ramana VV, Joseph N, Joshi A, Shouche Y, Suar M, Pattnaik AK, Rastogi G J Microbiol 10.1007/s12275-018-7549-x 2018 Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/analysis, Genes, Bacterial, *Genome, Bacterial, India, Lakes, Phospholipids/analysis, Phylogeny, Pseudomonas/chemistry/*classification/*genetics/isolation & purification, RNA, Ribosomal, 16S/genetics, Rhizosphere, Saline Waters, Sequence Analysis, DNA, *Soil Microbiology Phylogeny Genetics *
    Pseudomonas tianjinensis sp. nov., isolated from domestic sewage. Chen P, Li S, Li QX Int J Syst Evol Microbiol 10.1099/ijsem.0.002799 2018 Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, Pseudomonas/*classification/genetics/isolation & purification, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sewage/*microbiology, Vitamin K 2/analogs & derivatives/chemistry Phylogeny Transcriptome *
    Pseudomonas lopnurensis sp. nov., an endophytic bacterium isolated from Populus euphratica at the ancient Ugan river. Mamtimin T, Anwar N, Abdurahman M, Kurban M, Rozahon M, Mamtimin H, Hamood B, Rahman E, Wu M Antonie Van Leeuwenhoek 10.1007/s10482-021-01524-8 2021 Bacterial Typing Techniques, DNA, Bacterial/genetics, Phospholipids/analysis, Phylogeny, *Populus, Pseudomonas/genetics, RNA, Ribosomal, 16S/genetics, Rivers, Sequence Analysis, DNA Phylogeny Transcriptome *

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