Name: Erwinia amylovora EGYI
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 131712

Type strain:

Species: Erwinia amylovora

Strain Designation: EGYI

Culture col. no.: DSM 101800

Strain history: <- A. M. Embaby, Inst. of Grad. Studies and Res., Alexandria, Egypt; EGY1

NCBI tax ID(s): 552 (species)

SI-ID 408380

DSM 101800

Special Collections

DSMZ

Other strains from Erwinia amylovora

Section

When using BacDive for research please cite our paper

Erwinia amylovora EGYI is a mesophilic plant pathogen that was isolated from soil.

mesophilic
plant pathogen
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Enterobacterales*
	Family	*Erwiniaceae*
	Genus	*Erwinia*
	Species	**Erwinia amylovora**
	Full Scientific Name (LPSN)	Erwinia amylovora (Burrill 1882) Winslow et al. 1920 (Approved Lists 1980)

Synonym

"Micrococcus amylovorus"

Information on culture and growth conditions Culture and growth conditions

[Ref.: #23508]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #23508]

Culture medium growth

[Ref.: #23508]

Culture medium link

Medium recipe at MediaDive

[Ref.: #23508]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #23508]			growth	28 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23508]	Sample type/isolated from	soil
[Ref.: #23508]	Geographic location (country and/or sea, region)	Alexandria
[Ref.: #23508]	Country	Egypt
[Ref.: #23508]	Country ISO 3 Code	EGY
[Ref.: #23508]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KM597069 (>99% sequence identity) for Erwinia from Microbeatlas

Aquatic Samples	255
Soil Samples	90
Animal Samples	1537
Plant Samples	278
Total Samples	2160

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #23508]	Pathogenicity (plant)	yes
[Ref.: #23508]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #23508]	Erwinia amylovora strain EGY1 16S ribosomal RNA gene, partial sequence	KM597069	1514	GenBank ENA	552 tax ID

Availability in culture collections External links

[Ref.: #23508]

Culture collection no.

DSM 101800

[Ref.: #90103]

SI-ID 408380

Literature:

	Title	Authors	Journal	DOI	Year
	Unusual non-fluorescent broad spectrum siderophore activity (SID EGYII) by Pseudomonas aeruginosa strain EGYII DSM 101801 and a new insight towards simple siderophore bioassay.	Embaby AM, Heshmat Y, Hussein A	AMB Express	10.1186/s13568-016-0192-1	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23508

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 101800

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#90103

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID408380.1 )

* These data were automatically processed and therefore are not curated

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