Name: Actinomadura algeriensis ACD1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 131551

Type strain:

Species: Actinomadura algeriensis

Strain Designation: ACD1

Culture col. no.: DSM 46744, CECT 8841

Strain history: <- N. Sabaou, Alger, Algeria; ACD1

NCBI tax ID(s): 1679523 (species)

SI-ID 402801

DSM 46744

Section

Actinomadura algeriensis ACD1 is a spore-forming, mesophilic, Gram-positive bacterium that builds an aerial mycelium and was isolated from Saharan soil .

Gram-positive
spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Thermomonosporaceae*
	Genus	*Actinomadura*
	Species	**Actinomadura algeriensis**
	Full Scientific Name (LPSN)	Actinomadura algeriensis Lahoum et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69471]	Colony color	Brown red (3011)
[Ref.: #69471]	Cultivation medium used	ISP 7

[Ref.: #69471]	Colony color	Black red (3007)
[Ref.: #69471]	Cultivation medium used	ISP 2

[Ref.: #69471]	Colony color	Pastel violet (4009)
[Ref.: #69471]	Cultivation medium used	ISP 6

[Ref.: #69471]	Colony color	Purple red (3004), beige (1001)
[Ref.: #69471]	Cultivation medium used	suter without tyrosine

[Ref.: #69471]	Colony color	Purple red (3004), salmon pink (3022)
[Ref.: #69471]	Cultivation medium used	suter with tyrosine

[Ref.: #69471]	Colony color	Purple red (3004), strawberry red (3018)
[Ref.: #69471]	Cultivation medium used	ISP 5

[Ref.: #69471]	Colony color	Ruby red (3003)
[Ref.: #69471]	Cultivation medium used	ISP 4

[Ref.: #69471]	Colony color	Wine red (3005)
[Ref.: #69471]	Cultivation medium used	ISP 3

[Ref.: #69471]	Pigment production	no
[Ref.: #69471]	Pigment name	Melanin
[Ref.: #69471]	Pigment production	yes
[Ref.: #69471]	Pigmentation color	Purple red (3004), antique pink (3014), ruby red (3003), beige red (3012)
[Ref.: #69471]	Pigment name	soluble pigment

[Ref.: #69471]	Multicellular complex forming ability	no
[Ref.: #69471]	Multicellular complex name	Aerial mycelium
[Ref.: #69471]	Medium Name (multicellularity)	ISP 2

[Ref.: #69471]	Multicellular complex forming ability	yes
[Ref.: #69471]	Multicellular complex name	Aerial mycelium
[Ref.: #69471]	Multicellular complex color	Traffic white (9016), agate grey (7038)
[Ref.: #69471]	Medium Name (multicellularity)	ISP 3

[Ref.: #69471]	Multicellular complex forming ability	yes
[Ref.: #69471]	Multicellular complex name	Aerial mycelium
[Ref.: #69471]	Multicellular complex color	Pure white (9010)
[Ref.: #69471]	Medium Name (multicellularity)	ISP 4

[Ref.: #69471]	Multicellular complex forming ability	yes
[Ref.: #69471]	Multicellular complex name	Aerial mycelium
[Ref.: #69471]	Multicellular complex color	Platinum grey (7036), traffic white (9016)
[Ref.: #69471]	Medium Name (multicellularity)	ISP 5

[Ref.: #69471]	Multicellular complex forming ability	no
[Ref.: #69471]	Multicellular complex name	Aerial mycelium
[Ref.: #69471]	Medium Name (multicellularity)	ISP 6

[Ref.: #69471]	Multicellular complex forming ability	yes
[Ref.: #69471]	Multicellular complex name	Aerial mycelium
[Ref.: #69471]	Multicellular complex color	Traffic white (9016)
[Ref.: #69471]	Medium Name (multicellularity)	ISP 7

[Ref.: #69471]	Multicellular complex forming ability	no
[Ref.: #69471]	Multicellular complex name	Aerial mycelium
[Ref.: #69471]	Medium Name (multicellularity)	suter with tyrosine

[Ref.: #69471]	Multicellular complex forming ability	no
[Ref.: #69471]	Multicellular complex name	Aerial mycelium
[Ref.: #69471]	Medium Name (multicellularity)	suter without tyrosine

Multimedia content

[Ref.: #22778]

Caption:

Medium 553 28°C

[Ref.: #22778]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22778]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #22778]

Culture medium growth

[Ref.: #22778]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #22778]

Culture medium

GPHF-MEDIUM (DSMZ Medium 553)

[Ref.: #22778]

Culture medium growth

[Ref.: #22778]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22778]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22778]			growth	28 °C

[Ref.: #22778]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #69471]		NaCl		growth	0-2.5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #69471]	arabinose ChEBI	+	growth
[Ref.: #69471]	cellulose ChEBI	-	growth
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #69471]	fructose ChEBI	+	growth
[Ref.: #68379]	gelatin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #69471]	glucose ChEBI	+	growth
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #69471]	inositol ChEBI	-	growth
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #69471]	mannose ChEBI	+	growth
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #69471]	raffinose ChEBI	-	growth
[Ref.: #69471]	rhamnose ChEBI	+	growth
[Ref.: #69471]	sucrose ChEBI	-	growth
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	urea ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #69471]	xylose ChEBI	+	growth
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68379]	alkaline phosphatase	+	3.1.3.1	* from API Coryne, API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68379]	alpha-glucosidase	-	3.2.1.20	* from API Coryne
[Ref.: #68379]	beta-galactosidase	-	3.2.1.23	* from API Coryne, API zym
[Ref.: #68379]	beta-glucosidase	+	3.2.1.21	* from API Coryne, API zym
[Ref.: #68379]	beta-glucuronidase	-	3.2.1.31	* from API Coryne, API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68379]	gelatinase	+		* from API Coryne
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API Coryne, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API Coryne
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #69471]	3964	-	-	+	+	-	-	-	-	+	-	+	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #69471]	6148	not determinedn.d.	+	+/-	+	-	+	+	+/-	+/-	+	+	+	-	-	-	+/-	+	-	+/-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22778]	Sample type/isolated from	Saharan soil (22° 47' N, 5° 31' E)
[Ref.: #22778]	Geographic location (country and/or sea, region)	Sahara, Tamanrasset province, Hoggar
[Ref.: #22778]	Country	Algeria
[Ref.: #22778]	Country ISO 3 Code	DZA
[Ref.: #22778]	Continent	Africa
[Ref.: #22778]	Geographic location	22.7833°/5.5167°
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Desert
#Environmental	#Terrestrial	#Soil
#Climate	#Hot	#Arid

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22778]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22778]	Actinomadura algeriensis strain ACD1 16S ribosomal RNA gene, partial sequence	KT259320	1446	ENA	1679523 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Actinomadura algeriensis DSM 46744	GCA_014873935	contig	GenBank	1679523 tax ID	*
[Ref.: #66792]	Actinomadura algeriensis strain DSM 46744	1679523.3	wgs	PATRIC	1679523 tax ID	*
[Ref.: #66792]	Actinomadura algeriensis DSM 46744	2870812040	draft	JGI IMG/M	1679523 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Actinomadura algeriensis strain DSM 46744 PATRIC: 1679523.3
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Actinomadura algeriensis strain DSM 46744 PATRIC: 1679523.3
[Ref.: #69480]	motile	no	91.314	no
[Ref.: #69480]	gram-positive	yes	85.997	no
[Ref.: #69480]	anaerobic	no	98.296	no
[Ref.: #69480]	aerobic	yes	87.102	no
[Ref.: #69480]	halophile	no	82.486	no
[Ref.: #69480]	spore-forming	yes	93.426	no
[Ref.: #69480]	glucose-util	yes	88.653	yes
[Ref.: #69480]	flagellated	no	98.398	no
[Ref.: #69480]	thermophile	no	97.01	yes
[Ref.: #69480]	glucose-ferment	no	90.965	no

Availability in culture collections External links

[Ref.: #22778]

Culture collection no.

DSM 46744, CECT 8841

[Ref.: #89965]

SI-ID 402801

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinomadura algeriensis sp. nov., an actinobacterium isolated from Saharan soil.	Lahoum A, Bouras N, Mathieu F, Schumann P, Sproer C, Klenk HP, Sabaou N	Antonie Van Leeuwenhoek	10.1007/s10482-015-0617-x	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22778

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46744

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69471

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#89965

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID402801.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Actinomadura algeriensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Actinomadura algeriensis strain DSM 46744

Actinomadura algeriensis strain DSM 46744

Change proposal

Change proposal