Name: Alkalihalobacillus hemicentroti DSM 23007
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 1315

Type strain:

Species: Alkalihalobacillus hemicentroti

Culture col. no.: DSM 23007, KCTC 13710, JSM 076093

Strain history: <- S.-K. Tang and Y.-G. Chen, Yunnan Univ., Yunnan Inst. Microbiol. (YIM), Kunming, China; JSM 076093 <- Y.-G. Chen and Q.-H. Chen

NCBI tax ID(s): 582442 (species)

SI-ID 406178

DSM 23007

Section

Alkalihalobacillus hemicentroti DSM 23007 is a mesophilic bacterium that was isolated from sea urchin .

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Alkalihalobacillus*
	Species	**Alkalihalobacillus hemicentroti**
	Full Scientific Name (LPSN)	Alkalihalobacillus hemicentroti corrig. (Chen et al. 2011) Patel and Gupta 2020

	Synonym	"Pseudalkalibacillus* hemicentroti"*
	Synonym	Bacillus hemicentroti
	Synonym	Alkalihalobacillus haemicentroti

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16647]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #16647]

Culture medium growth

[Ref.: #16647]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16647]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #16647]			growth	28 °C

[Ref.: #16647]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16647]	Sample type/isolated from	sea urchin (Hemicentrotus pulcherrimus)
[Ref.: #16647]	Host species	Hemicentrotus pulcherrimus
[Ref.: #16647]	Geographic location (country and/or sea, region)	Guangdong Province, Naozhou Island (20° 52–56' N 110° 33–38' E)
[Ref.: #16647]	Country	China
[Ref.: #16647]	Country ISO 3 Code	CHN
[Ref.: #16647]	Continent	Asia
[Ref.: #16647]	Geographic location	20.9167°/110.5830°
* marker position based on {}

Isolation sources categories

#Host

#Invertebrates (Other)

#Echinodermata

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HM460885 (>99% sequence identity) for Alkalihalobacillus hemicentroti from Microbeatlas

Aquatic Samples
Soil Samples
Animal Samples	1
Plant Samples
Total Samples	1

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16647]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16647]	Bacillus hemicentroti strain JSM 076093 16S ribosomal RNA gene, partial sequence	HM460885	1482	ENA	582442 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bacillus hemicentroti DSM 23007	2928982271	draft	JGI IMG/M	582442 tax ID	*

[Ref.: #16647]

GC-content

38.8 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #16647]

Culture collection no.

DSM 23007, KCTC 13710, JSM 076093

[Ref.: #70965]

SI-ID 406178

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bacillus hemicentroti sp. nov., a moderate halophile isolated from a sea urchin.	Chen YG, Zhang YQ, He JW, Klenk HP, Xiao JQ, Zhu HY, Tang SK, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.026732-0	2011	*

References

#16647

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23007

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#70965

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406178.1 )

* These data were automatically processed and therefore are not curated

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