Pseudomonas resinovorans DSM 21078 is an obligate aerobe, mesophilic, Gram-negative prokaryote that was isolated from Soil.
Gram-negative motile rod-shaped obligate aerobe mesophilic genome sequence 16S sequence
SI-ID 389302
| @ref 20215 |
Last LPSN update
2025-12-16 09:50:01 |
| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pseudomonadales |
| Family Pseudomonadaceae |
| Genus Pseudomonas |
| Species Pseudomonas resinovorans |
| Full scientific name Pseudomonas resinovorans Delaporte et al. 1961 (Approved Lists 1980) |
| Synonyms (1) |
| BacDive ID | Other strains from Pseudomonas resinovorans (1) | Type strain |
|---|---|---|
| 161817 | P. resinovorans JCM 16565 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 15545 | REACTIVATION WITH LIQUID MEDIUM (DSMZ Medium 535b) | Medium recipe at MediaDive  | Name: REACTIVATION WITH LIQUID MEDIUM (DSMZ Medium 535b) Composition: Trypticase soy broth 30.0 g/l Casein peptone 17.0 g/l Agar 15.0 g/l NaCl 5.0 g/l Soy peptone 3.0 g/l K2HPO4 2.5 g/l D(+)-Glucose 2.5 g/l Distilled water | ||
| 37607 | MEDIUM 3 - Columbia agar | Columbia agar (39.000 g);distilled water (1000.000 ml) | |||
| 122159 | CIP Medium 72 | Medium recipe at CIP | |||
| 122159 | CIP Medium 3 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 97.7 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68369 | 17128 ChEBI | adipate | - | assimilation | from API 20NE |
| 68369 | 29016 ChEBI | arginine | + | hydrolysis | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | + | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | fermentation | from API 20NE |
| 68369 | 16899 ChEBI | D-mannitol | - | assimilation | from API 20NE |
| 68369 | 16024 ChEBI | D-mannose | - | assimilation | from API 20NE |
| 68369 | 27689 ChEBI | decanoate | + | assimilation | from API 20NE |
| 68369 | 4853 ChEBI | esculin | - | hydrolysis | from API 20NE |
| 68369 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20NE |
| 68369 | 24265 ChEBI | gluconate | - | assimilation | from API 20NE |
| 68369 | 30849 ChEBI | L-arabinose | - | assimilation | from API 20NE |
| 68369 | 25115 ChEBI | malate | + | assimilation | from API 20NE |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 68369 | 59640 ChEBI | N-acetylglucosamine | - | assimilation | from API 20NE |
| 122159 | 17632 ChEBI | nitrate | - | reduction | |
| 122159 | 16301 ChEBI | nitrite | - | reduction | |
| 68369 | 27897 ChEBI | tryptophan | - | energy source | from API 20NE |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68369 | arginine dihydrolase | + | 3.5.3.6 | from API 20NE |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68369 | beta-glucosidase | - | 3.2.1.21 | from API 20NE |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 122159 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68369 | cytochrome oxidase | + | 1.9.3.1 | from API 20NE |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68369 | gelatinase | - | from API 20NE | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | + | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 122159 | oxidase | + | ||
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 122159 | urease | - | 3.5.1.5 | |
| 68369 | urease | - | 3.5.1.5 | from API 20NE |
| 68382 | valine arylamidase | - | from API zym |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM42354v1 assembly for Metapseudomonas resinovorans DSM 21078 | scaffold | GCA_000423545   | 1123020.3  | 2524614671  | 1123020 | 62.76 | |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Pseudomonas resinovorans partial 16S rRNA gene, type strain ICMP 13541T | AJ308314 | 1358 |  | 53412 | |
| 15545 | Pseudomonas resinovorans gene for 16S rRNA, strain: ATCC 14235 | AB021373 | 1507 | | 53412 | |
| 15545 | P.resinovorans 16S rRNA gene | Z76668 | 1465 | | 53412 | |
| 124043 | Pseudomonas resinovorans strain ATCC 14235 16S ribosomal RNA gene, partial sequence. | MN900587 | 682 | | 53412 | |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Enzymology | Modeling of fermentative polyhydroxyalkanoate production from Cerbera odollam oil using Monod-based and multi-scale kinetic models. | Lim SW, Kansedo J, Tan IS, Nandong J, Tan YH, Lam MK, Ongkudon CM. | Bioresour Technol | 10.1016/j.biortech.2025.132918 | 2025 | |
| One-pot polyhydroxyalkanoate (PHA) production from Cerbera odollam (sea mango) oil using Pseudomonas resinovorans: Optimal fermentation design and mechanism. | Lim SW, Kansedo J, Tan IS, Nandong J, Tan YH, Lam MK, Ongkudon CM. | J Environ Manage | 10.1016/j.jenvman.2025.124394 | 2025 | | |
| Genetics | Genome sequence of Pseudomonas sp. MAHUQ-62 isolated from a pumpkin garden located in Anseong, South Korea. | Huq MA, Islam MM, Rahman MS. | Microbiol Resour Announc | 10.1128/mra.00915-25 | 2025 | |
| Semi-rational engineering of an amino acid racemase that is stabilized in aqueous/organic solvent mixtures. | Femmer C, Bechtold M, Panke S. | Biotechnol Bioeng | 10.1002/bit.27449 | 2020 | | |
| Impact of Co-Substrates on the Production of Poly(3-hydroxybutyrate-co-3-hydroxyvalerate) by Burkholderia thailandensis E264 | Hernandez-Alonso J, Pichardo-Sanchez M, Huerta-Ochoa S, Roman-Guerrero A, Rodriguez-Fernandez O, Vazquez-Torres H, Olayo-Gonzalez R, Olayo-Valles R, Rodriguez-Duran L, Prado-Barragan L. | Materials (Basel) | 2025 | | ||
| Upgrading the organic fraction of municipal solid waste to poly(3-hydroxybutyrate). | Izaguirre JK, da Fonseca MMR, Fernandes P, Villaran MC, Castanon S, Cesario MT. | Bioresour Technol | 10.1016/j.biortech.2019.121785 | 2019 | | |
| Metabolism | Optimization of polyhydroxybutyrate production by experimental design of combined ternary mixture (glucose, xylose and arabinose) and process variables (sugar concentration, molar C:N ratio). | Li M, Eskridge KM, Wilkins MR. | Bioprocess Biosyst Eng | 10.1007/s00449-019-02146-1 | 2019 | |
| Enhancement of Bacterial Survival and Self-Healing Performance in Mortars After Exposure to Negative Temperature Using Alumina Hollow Spheres as Bacterial Carriers. | Wang YS, Zhou YZ, Wang XD, Zhang GZ. | Materials (Basel) | 10.3390/ma18102245 | 2025 | | |
| Validation List no. 219. Valid publication of new names and new combinations effectively published outside the IJSEM. | Oren A, Goker M. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.006452 | 2024 | | |
| Enzymology | Characterization of the antagonistic potential of the glyphosate-tolerant Pseudomonas resinovorans SZMC 25872 strain against the plant pathogenic bacterium Agrobacterium tumefaciens. | Zhumakayev AR, Varga M, Voros M, Kocsube S, Ramteke PW, Szekeres A, Vagvolgyi C, Hatvani L, Marik T. | Front Plant Sci | 10.3389/fpls.2022.1034237 | 2022 | |
| Burkholderia sacchari DSM 17165: A source of compositionally-tunable block-copolymeric short-chain poly(hydroxyalkanoates) from xylose and levulinic acid. | Ashby RD, Solaiman DKY, Nunez A, Strahan GD, Johnston DB. | Bioresour Technol | 10.1016/j.biortech.2017.12.045 | 2018 | | |
| A Novel Strain Burkholderia theae GS2Y Exhibits Strong Biocontrol Potential Against Fungal Diseases in Tea Plants (Camellia sinensis). | Dong Y, Wang X, Feng GD, Yao Q, Zhu H. | Cells | 10.3390/cells13211768 | 2024 | | |
| Phosphorus Release from Nano-Hydroxyapatite Derived from Biowastes in the Presence of Phosphate-Solubilizing Bacteria: A Soil Column Experiment. | Pilotto L, Scalera F, Piccirillo C, Marchiol L, Zuluaga MYA, Pii Y, Cesco S, Civilini M, Fellet G. | J Agric Food Chem | 10.1021/acs.jafc.4c09325 | 2025 | | |
| Distinct microbiota assembly and functional patterns in disease-resistant and susceptible varieties of tobacco. | Yang L, Guo Y, Yang H, Li S, Zhang Y, Gao C, Wei T, Hao L. | Front Microbiol | 10.3389/fmicb.2024.1361883 | 2024 | | |
| Draft Genome Sequence of Lipopeptide-Producing Strain Pseudomonas fluorescens DSM 11579 and Comparative Genomics with Pseudomonas sp. Strain SH-C52, a Closely Related Lipopeptide-Producing Strain. | Kirchner N, Cano-Prieto C, van der Voort M, Raaijmakers JM, Gross H. | Microbiol Resour Announc | 10.1128/mra.00304-20 | 2020 | | |
| Phylogeny | Phylogenomics studies and molecular markers reliably demarcate genus Pseudomonas sensu stricto and twelve other Pseudomonadaceae species clades representing novel and emended genera. | Rudra B, Gupta RS. | Front Microbiol | 10.3389/fmicb.2023.1273665 | 2023 | |
| Metabolism | Enhanced bioproduction of poly-3-hydroxybutyrate from wheat straw lignocellulosic hydrolysates. | Cesario MT, Raposo RS, de Almeida MC, van Keulen F, Ferreira BS, da Fonseca MM. | N Biotechnol | 10.1016/j.nbt.2013.10.004 | 2014 | |
| Draft Genome Sequence of the Type Strain Pseudomonas jessenii DSM 17150. | Furmanczyk EM, Kaminski MA, Dziembowski A, Lipinski L, Sobczak A. | Genome Announc | 10.1128/genomea.01035-17 | 2017 | | |
| Metabolism | Production of poly(3-hydroxybutyrate-co-4-hydroxybutyrate) by Burkholderia sacchari using wheat straw hydrolysates and gamma-butyrolactone. | Cesario MT, Raposo RS, M D de Almeida MC, van Keulen F, Ferreira BS, Telo JP, R da Fonseca MM. | Int J Biol Macromol | 10.1016/j.ijbiomac.2014.04.054 | 2014 | |
| Production of polyhydroxyalkanoate (PHA) biopolymer from crop residue using bacteria as an alternative to plastics: a review. | Chouhan A, Tiwari A. | RSC Adv | 10.1039/d4ra08505a | 2025 | | |
| Diversity analysis of endophytes with antimicrobial and antioxidant potential from Viola odorata: an endemic plant species of the Himalayas. | Salwan R, Salwan R, Rana A, Saini R, Sharma A, Sharma M, Sharma V. | Braz J Microbiol | 10.1007/s42770-023-01010-5 | 2023 | | |
| BioCAT: Search for biosynthetic gene clusters producing nonribosomal peptides with known structure. | Konanov DN, Krivonos DV, Ilina EN, Babenko VV. | Comput Struct Biotechnol J | 10.1016/j.csbj.2022.02.013 | 2022 | | |
| Hot Spots of Site-Specific Integration into the Sinorhizobium meliloti Chromosome. | Vladimirova ME, Roumiantseva ML, Saksaganskaia AS, Muntyan VS, Gaponov SP, Mengoni A. | Int J Mol Sci | 10.3390/ijms251910421 | 2024 | | |
| Evaluation of polyhydroxyalkanoate (PHA) synthesis by Pichia sp. TSLS24 yeast isolated in Vietnam. | Thu NTT, Hoang LH, Cuong PK, Viet-Linh N, Nga TTH, Kim DD, Leong YK, Nhi-Cong LT. | Sci Rep | 10.1038/s41598-023-28220-z | 2023 | | |
| The Hyperproduction of Polyhydroxybutyrate Using Bacillus mycoides ICRI89 through Enzymatic Hydrolysis of Affordable Cardboard. | Abdelmalek F, Steinbuchel A, Rofeal M. | Polymers (Basel) | 10.3390/polym14142810 | 2022 | | |
| Extraction of Polyhydroxyalkanoates from Purple Non-Sulfur Bacteria by Non-Chlorinated Solvents. | Filippi S, Cinelli P, Mezzetta A, Carlozzi P, Seggiani M. | Polymers (Basel) | 10.3390/polym13234163 | 2021 | | |
| Metabolism | Model-based characterization of an amino acid racemase from Pseudomonas putida DSM 3263 for application in medium-constrained continuous processes. | Bechtold M, Makart S, Reiss R, Alder P, Panke S. | Biotechnol Bioeng | 10.1002/bit.21481 | 2007 | |
| Genomic scanning enabling discovery of a new antibacterial bicyclic carbamate-containing alkaloid. | Fang Q, Wu L, Urwald C, Mugat M, Wang S, Kyeremeh K, Philips C, Law S, Zhou Y, Deng H. | Synth Syst Biotechnol | 10.1016/j.synbio.2021.01.002 | 2021 | | |
| Metabolism | Identification and characterization of Pseudomonas membrane transporters necessary for utilization of the siderophore pyridine-2,6-bis(thiocarboxylic acid) (PDTC). | Leach LH, Lewis TA. | Microbiology (Reading) | 10.1099/mic.0.29116-0 | 2006 | |
| Metabolism | The role of the siderophore pyridine-2,6-bis (thiocarboxylic acid) (PDTC) in zinc utilization by Pseudomonas putida DSM 3601. | Leach LH, Morris JC, Lewis TA. | Biometals | 10.1007/s10534-006-9035-x | 2007 | |
| Phylogeny | The status of the genus name Halovibrio Fendrich 1989 and the identity of the strains Pseudomonas halophila DSM 3050 and Halomonas variabilis DSM 3051. Request for an opinion. | Sorokin DY, Tindall BJ. | Int J Syst Evol Microbiol | 10.1099/ijs.0.63965-0 | 2006 | |
| Organic matter degradation in the deep, sulfidic waters of the Black Sea: insights into the ecophysiology of novel anaerobic bacteria. | Yadav S, Koenen M, Bale NJ, Reitsma W, Engelmann JC, Stefanova K, Damste JSS, Villanueva L. | Microbiome | 10.1186/s40168-024-01816-x | 2024 | | |
| Economic and environmental assessment of bacterial poly(3-hydroxybutyrate) production from the organic fraction of municipal solid waste. | Izaguirre JK, Baranano L, Castanon S, Santos JAL, Cesario MT, da Fonseca MMR, Alkorta I, Garbisu C. | Bioresour Bioprocess | 10.1186/s40643-021-00392-4 | 2021 | | |
| The Small RNA NcS25 Regulates Biological Amine-Transporting Outer Membrane Porin BCAL3473 in Burkholderia cenocepacia. | Sass AM, Coenye T. | mSphere | 10.1128/msphere.00083-23 | 2023 | | |
| Polymorphisms within the prnD and pltC genes from pyrrolnitrin and pyoluteorin-producing Pseudomonas and Burkholderia spp. | Souza JT, Raaijmakers JM. | FEMS Microbiol Ecol | 10.1111/j.1574-6941.2003.tb01042.x | 2003 | | |
| SB-253514 and analogues: novel inhibitors of lipoprotein associated phospholipase A2 produced by Pseudomonas fluorescens DSM 11579. II. Physico-chemical properties and structure elucidation. | Busby DJ, Copley RC, Hueso JA, Readshaw SA, Rivera A. | J Antibiot (Tokyo) | 10.7164/antibiotics.53.670 | 2000 | | |
| Enzymology | SB-253514 and analogues; novel inhibitors of lipoprotein-associated phospholipase A2 produced by Pseudomonas fluorescens DSM 11579. I. Fermentation of producing strain, isolation and biological activity. | Thirkettle J, Alvarez E, Boyd H, Brown M, Diez E, Hueso J, Elson S, Fulston M, Gershater C, Morata ML, Perez P, Ready S, Sanchez-Puelles JM, Sheridan R, Stefanska A, Warr S. | J Antibiot (Tokyo) | 10.7164/antibiotics.53.664 | 2000 | |
| Genetics | Comparative Genomic Analysis of Three Pseudomonas Species Isolated from the Eastern Oyster (Crassostrea virginica) Tissues, Mantle Fluid, and the Overlying Estuarine Water Column. | Pathak A, Stothard P, Chauhan A. | Microorganisms | 10.3390/microorganisms9030490 | 2021 | |
| The role of small proteins in Burkholderia cenocepacia J2315 biofilm formation, persistence and intracellular growth. | Van Acker H, Crabbe A, Jurenas D, Ostyn L, Sass A, Daled S, Dhaenens M, Deforce D, Teirlinck E, De Keersmaecker H, Braeckmans K, Van Melderen L, Coenye T. | Biofilm | 10.1016/j.bioflm.2019.100001 | 2019 | | |
| Metabolism | LuxR Solos from Environmental Fluorescent Pseudomonads. | Bez C, Covaceuszach S, Bertani I, Choudhary KS, Venturi V. | mSphere | 10.1128/msphere.01322-20 | 2021 | |
| Fed-Batch Synthesis of Poly(3-Hydroxybutyrate) and Poly(3-Hydroxybutyrate-co-4-Hydroxybutyrate) from Sucrose and 4-Hydroxybutyrate Precursors by Burkholderia sacchari Strain DSM 17165. | Miranda De Sousa Dias M, Koller M, Puppi D, Morelli A, Chiellini F, Braunegg G. | Bioengineering (Basel) | 10.3390/bioengineering4020036 | 2017 | | |
| Metabolism | Role for ferredoxin:NAD(P)H oxidoreductase (FprA) in sulfate assimilation and siderophore biosynthesis in Pseudomonads. | Lewis TA, Glassing A, Harper J, Franklin MJ. | J Bacteriol | 10.1128/jb.00528-13 | 2013 | |
| Genetics | Complete Genome Sequence and Function Gene Identify of Prometryne-Degrading Strain Pseudomonas sp. DY-1. | Liang D, Xiao C, Song F, Li H, Liu R, Gao J. | Microorganisms | 10.3390/microorganisms9061261 | 2021 | |
| Metabolism | Effect of nitrogen limitation on long-side-chain poly-beta-hydroxyalkanoate synthesis by Pseudomonas resinovorans. | Ramsay BA, Saracovan I, Ramsay JA, Marchessault RH. | Appl Environ Microbiol | 10.1128/aem.58.2.744-746.1992 | 1992 | |
| Development and evaluation of oligonucleotide chip based on the 16S-23S rRNA gene spacer region for detection of pathogenic microorganisms associated with sepsis. | Kim CM, Song ES, Jang HJ, Kim HJ, Lee S, Shin JH, Kim SJ, Jeong SH, Jeong J, Koh K, Choi GE, Lee EY, Chang CL. | J Clin Microbiol | 10.1128/jcm.01130-09 | 2010 | | |
| Metabolism | Regulation of pyrimidine synthesis in Pseudomonas resinovorans. | West TP | Lett Appl Microbiol | 10.1111/j.1472-765X.2005.01703.x | 2005 | |
| Competition between two microbial populations in a sequencing fed-batch reactor: theory, experimental verification, and implications for waste treatment applications. | Dikshitulu S, Baltzis BC, Lewandowski GA, Pavlou S | Biotechnol Bioeng | 10.1002/bit.260420513 | 1993 | | |
| Phylogeny | Sphingobacterium thermophilum sp. nov., of the phylum Bacteroidetes, isolated from compost. | Yabe S, Aiba Y, Sakai Y, Hazaka M, Kawahara K, Yokota A. | Int J Syst Evol Microbiol | 10.1099/ijs.0.042481-0 | 2013 | |
| Pseudomonas forestsoilum sp. nov. and P. tohonis biocontrol bacterial wilt by quenching 3-hydroxypalmitic acid methyl ester. | Wang S, Hu M, Chen H, Li C, Xue Y, Song X, Qi Y, Liu F, Zhou X, Zhang LH, Zhou J. | Front Plant Sci | 10.3389/fpls.2023.1193297 | 2023 | | |
| Phylogeny | Pseudomonas marincola sp. nov., isolated from marine environments. | Romanenko LA, Uchino M, Tebo BM, Tanaka N, Frolova GM, Mikhailov VV. | Int J Syst Evol Microbiol | 10.1099/ijs.0.65406-0 | 2008 | |
| Phylogeny | Extremely halophilic denitrifying bacteria from hypersaline inland lakes, Halovibrio denitrificans sp. nov. and Halospina denitrificans gen. nov., sp. nov., and evidence that the genus name Halovibrio Fendrich 1989 with the type species Halovibrio variabilis should be associated with DSM 3050. | Sorokin DY, Tourova TP, Galinski EA, Belloch C, Tindall BJ. | Int J Syst Evol Microbiol | 10.1099/ijs.0.63964-0 | 2006 | |
| Phylogeny | Pseudomonas lalkuanensis sp. nov., isolated from a bacterial consortia of contaminated soil enriched for the remediation of e-waste. | Thorat V, Kirdat K, Tiwarekar B, DaCosta E, Debbarma P, Shouche Y, Sathe S, Goel R, Lodha T, Yadav A | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004559 | 2020 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive13147.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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