Name: Mesobacillus stamsii BoGlc83
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 131447

Type strain:

Species: Mesobacillus stamsii

Strain Designation: BoGlc83

Culture col. no.: DSM 19598, JCM 30025

Strain history: B. Schink BoGlc83.

NCBI tax ID(s): 225347 (species)

SI-ID 405647

DSM 19598

Section

Mesobacillus stamsii BoGlc83 is an aerobe, mesophilic bacterium that was isolated from profundal anoxic lake sediment .

aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Mesobacillus*
	Species	**Mesobacillus stamsii**
	Full Scientific Name (LPSN)	Mesobacillus stamsii (Müller et al. 2016) Patel and Gupta 2020

Synonym

Bacillus stamsii

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22674]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #22674]

Culture medium growth

[Ref.: #22674]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22674]

Culture medium composition

expand / minimize

[Ref.: #22674]

Culture medium

ANAEROBIC FRESHWATER (FWM) MEDIUM (DSMZ Medium 503)

[Ref.: #22674]

Culture medium growth

[Ref.: #22674]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22674]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22674]			growth	30 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #22674]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #22674]	Oxygen tolerance	aerobe
[Ref.: #22674]	Oxygen tolerance	anaerobe

[Ref.: #67770]

Observation

quinones: MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22674]	Sample type/isolated from	profundal anoxic lake sediment (80 meter water depth)
[Ref.: #22674]	Geographic location (country and/or sea, region)	Lake Constance, Konstanz
[Ref.: #22674]	Country	Germany
[Ref.: #22674]	Country ISO 3 Code	DEU
[Ref.: #22674]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Littoral sediment of Lake Constance
[Ref.: #67770]	Geographic location (country and/or sea, region)	Konstanz
[Ref.: #67770]	Country	Germany
[Ref.: #67770]	Country ISO 3 Code	DEU
[Ref.: #67770]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Sediment
#Condition	#Anoxic (anaerobic)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY189804 (>99% sequence identity) for Mesobacillus from Microbeatlas

Aquatic Samples	8
Soil Samples	33
Animal Samples	1
Plant Samples	5
Total Samples	47

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22674]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22674]	Bacillus stamsii strain BoGlc83 16S ribosomal RNA gene, partial sequence	AY189804	1488	ENA	225347 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Mesobacillus stamsii DSM 19598	2926592867	draft	JGI IMG/M	225347 tax ID	*

[Ref.: #22674]	GC-content	42.8 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	42.8 mol%

Availability in culture collections External links

[Ref.: #22674]

Culture collection no.

DSM 19598, JCM 30025

[Ref.: #89869]

SI-ID 405647

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bacillus stamsii sp. nov., a facultatively anaerobic sugar degrader that is numerically dominant in freshwater lake sediment.	Muller N, Scherag FD, Pester M, Schink B	Syst Appl Microbiol	10.1016/j.syapm.2015.06.004	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22674

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19598

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#89869

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405647.1 )

* These data were automatically processed and therefore are not curated

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