Pseudomonas azotoformans (DSM 18862, IAM 1603, CCUG 12536)

Name: Pseudomonas azotoformans (DSM 18862, IAM 1603, CCUG 12536)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 13141

Type strain

Culture col. no. DSM 18862 IAM 1603 CCUG 12536 JCM 2777 CIP 106744 5 more

NCBI tax ID(s) 1215094 47878

Special Collections DSMZ CCUG JCM CIP

History <- IAM K. Komagata KS 0034 <-- AJ 2173 <-- IAM 1603 <-- H. Iizuka and K. Komagata F3. CIP <- 2000, IAM <- H. Iizuka & K. Komagata: strain AJ 2173

Links

Pseudomonas azotoformans DSM 18862 is an aerobe, Gram-negative, motile bacterium that was isolated from paddies.

Gram-negative motile rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 56505

LMG 21611,CCUG 12536,CIP 106744,IAM 1603,JCM 2777,IFO 12693,AS 1.1792,NBRC 12693,BCRC 11021,CCRC 11021,DSM 18862,CGMCC 1.1792

@ref 20215

Last LPSN update 2026-02-09 11:21:03

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Species Pseudomonas azotoformans

Full scientific name Pseudomonas azotoformans Iizuka and Komagata 1963 (Approved Lists 1980)

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
116693	negative	rod-shaped
125438			91.417
125438	negative		99
125439	negative		96.1

Pigmentation

@ref	Production	Name
116693		Pyocyanin

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
7752	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
39570	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
116693	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
7752	positive	growth	28
39570	positive	growth	25
45735	positive	growth	20-30
67770	positive	growth	30
116693	positive	growth	5-30
116693	negative	growth	37
116693	negative	growth	41

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
45735	aerobe
116693	obligate aerobe
125438	aerobe	94.346
125439	obligate aerobe	94.5

Spore formation

@ref	Spore formation	Confidence
125439		97

Halophily

@ref	Salt	Growth	Tested relation	Concentration
116693	NaCl	positive	growth	0-6 %
116693	NaCl		growth	8 %
116693	NaCl		growth	10 %

Observation

67770

Observationquinones: Q-9

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	+	assimilation	from API 20NE
68369	29016 ChEBI	arginine	+	hydrolysis	from API 20NE
116693	16947 ChEBI	citrate	+	carbon source
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
116693	4853 ChEBI	esculin	-	hydrolysis
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	+	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
116693	17632 ChEBI	nitrate	+	reduction
116693	17632 ChEBI	nitrate	+	respiration
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
116693	16301 ChEBI	nitrite	+	reduction
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
116693	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE
116693	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
116693	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
116693	amylase	-
68369	arginine dihydrolase	+	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
116693	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
116693	caseinase	+	3.4.21.50
116693	catalase	+	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
116693	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
116693	gelatinase	+/-
68369	gelatinase	+		from API 20NE
116693	lecithinase	+
68382	leucine arylamidase	+	3.4.11.1	from API zym
116693	lipase	+
68382	lipase (C 14)	+		from API zym
116693	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
116693	ornithine decarboxylase	-	4.1.1.17
116693	oxidase	+
116693	protease	+
68382	trypsin	+	3.4.21.4	from API zym
116693	tryptophan deaminase	-
116693	tween esterase	-
116693	urease	-	3.5.1.5
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
116693	-	+	+	+	+	+	+	+	+	+	+	+	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
7752	+	-	-	+	-	-	+	-	+	+	+	+	+	-	+	+	+	+	+	-	+
7752	+	-	-	+	-	-	+	-	+	+	+	+	+	-	+	+	+	+	+	-	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
116693	not determinedn.d.	+	+	+	+	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	+	+	-	-	-	-	+	+	+	-	-	+	+	+	-	-	+	+	-	+	+	-	-	+	+	+	-	+	+	+	+	+	-	+	+	+	+	-	+	+	+	-	+	+	+	-	-	-	-	-	+	+	+	+	-	+	+	+	-	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Agriculture	#Field
#Host	#Plants	#Herbaceous plants (Grass,Crops)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
7752	paddies		Japan	JPN	Asia
45735	Japanese unhulled rice	Tokyo	Japan	JPN	Asia
116693	Food, Japanese unhulled rice

Taxonmaps

69479

Global distribution of 16S sequence D84009 (>99% sequence identity) for Pseudomonas from Microbeatlas

Aquatic Samples	1631
Soil Samples	874
Animal Samples	3216
Plant Samples	2451
Total Samples	8172

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7752	1	Risk group (German classification) According to TRBA 466
116693	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	IMG-taxon 2636416017 annotated assembly for Pseudomonas azotoformans LMG 21611	chromosome	GCA_900103345	47878.15	2636416017	47878	89.49
67770	DSM_18862T assembly for Pseudomonas azotoformans	contig	GCA_900624915	47878.32	8119791325	47878	73.25
67770	ASM187041v1 assembly for Pseudomonas azotoformans LMG 21611	contig	GCA_001870415	47878.14	2917113043	47878	72.5
67770	ASM209151v1 assembly for Pseudomonas azotoformans NBRC 12693	contig	GCA_002091515	1215094.4	2969350331	1215094	69.76
67770	ASM198320v1 assembly for Pseudomonas azotoformans DSM 18862	contig	GCA_001983205	47878.17	2917196912	47878	61.61

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
7752	Pseudomonas azotoformans 16S rRNA gene, complete sequence	D84009	1522	47878
67770	Pseudomonas azotoformans gene for 16S rRNA, partial sequence, strain: NBRC 12693	AB680322	1462	47878
124043	Pseudomonas azotoformans culture DSM:18862 16S ribosomal RNA gene, partial sequence.	KX186937	1431	47878
124043	Pseudomonas azotoformans strain NBRC 12693 16S ribosomal RNA gene, partial sequence.	OP164742	1443	47878

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Pseudomonas azotoformans NBRC 12693
NCBI: GCA_002091515

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	94.50	no
125439	gram_stain	BacteriaNetⓘ	negative	96.10	no
125439	motility	BacteriaNetⓘ	yes	78.90	no
125439	spore_formation	BacteriaNetⓘ	no	97.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pseudomonas azotoformans strain LMG 21611
PATRIC: 47878.15

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.00	no
125438	anaerobic	anaerobicⓘ	no	98.87	yes
125438	spore-forming	spore-formingⓘ	no	85.79	no
125438	aerobic	aerobicⓘ	yes	94.35	yes
125438	thermophilic	thermophileⓘ	no	99.00	yes
125438	flagellated	motile2+ⓘ	yes	91.42	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Characterization of Rhizosphere Microbial Diversity and Selection of Plant-Growth-Promoting Bacteria at the Flowering and Fruiting Stages of Rapeseed.	Wang M, Sun H, Xu Z.	Plants (Basel)	10.3390/plants13020329	2024
	Pseudomonas azotoformans Belonging to Pseudomonas fluorescens Group as Causative Agent of Blue Coloration in Carcasses of Slaughterhouse Rabbits.	Circella E, Schiavone A, Barrasso R, Camarda A, Pugliese N, Bozzo G.	Animals (Basel)	10.3390/ani10020256	2020
Metabolism	RNA Interference Directed against the Transglutaminase Gene Triggers Dysbiosis of Gut Microbiota in Drosophila.	Sekihara S, Shibata T, Hyakkendani M, Kawabata SI.	J Biol Chem	10.1074/jbc.m116.761791	2016
Pathogenicity	Bacterial subfamily of LuxR regulators that respond to plant compounds.	Subramoni S, Gonzalez JF, Johnson A, Pechy-Tarr M, Rochat L, Paulsen I, Loper JE, Keel C, Venturi V.	Appl Environ Microbiol	10.1128/aem.00183-11	2011
	Investigation and determination of CoQ10(H2) and CoQ10(H4) species from black yeast-like fungi and filamentous fungi.	Jumpathong J, Nishida I, Matsuo Y, Kaino T, Kawamukai M.	Biosci Biotechnol Biochem	10.1093/bbb/zbae149	2024
	Diversity analysis of endophytes with antimicrobial and antioxidant potential from Viola odorata: an endemic plant species of the Himalayas.	Salwan R, Salwan R, Rana A, Saini R, Sharma A, Sharma M, Sharma V.	Braz J Microbiol	10.1007/s42770-023-01010-5	2023
	Oak (Quercus robur) Associated Endophytic Paenibacillus sp. Promotes Poplar (Populus spp.) Root Growth In Vitro.	Vaitiekunaite D, Kuusiene S, Beniusyte E.	Microorganisms	10.3390/microorganisms9061151	2021
	Differentiation of Closely Related Oak-Associated Gram-Negative Bacteria by Label-Free Surface Enhanced Raman Spectroscopy (SERS).	Vaitiekunaite D, Snitka V.	Microorganisms	10.3390/microorganisms9091969	2021
Metabolism	Detection and function of the intramolecular disulfide bond in arginine racemase: an enzyme with broad substrate specificity.	Matsui D, Oikawa T.	Chem Biodivers	10.1002/cbdv.200900258	2010
	Effect of Chronic Consumption of Sweeteners on Microbiota and Immunity in the Small Intestine of Young Mice.	Martinez-Carrillo BE, Rosales-Gomez CA, Ramirez-Duran N, Resendiz-Albor AA, Escoto-Herrera JA, Mondragon-Velasquez T, Valdes-Ramos R, Castillo-Cardiel A.	Int J Food Sci	10.1155/2019/9619020	2019
	Genome assembly of Pseudomonas sp. strain SED1^T, a psychrotolerant bacterium isolated from Deception Glacier (Washington, USA).	Shain DH, Klein EA.	Microbiol Resour Announc	10.1128/mra.00125-24	2024
Phylogeny	Mining the Microbiome of Key Species from African Savanna Woodlands: Potential for Soil Health Improvement and Plant Growth Promotion.	Maquia IS, Fareleira P, Videira E Castro I, Brito DRA, Soares R, Chauque A, Ferreira-Pinto MM, Lumini E, Berruti A, Ribeiro NS, Marques I, Ribeiro-Barros AI.	Microorganisms	10.3390/microorganisms8091291	2020
Genetics	Identification and specificity validation of unique and antimicrobial resistance genes to trace suspected pathogenic AMR bacteria and to monitor the development of AMR in non-AMR strains in the environment and clinical settings.	Rekadwad BN, Pramod N, Rao MPN, Hashem A, Avila-Quezada GD, Abd Allah EF.	Saudi J Biol Sci	10.1016/j.sjbs.2023.103869	2023
Phylogeny	Isolation, identification and characterization of a new lipolytic pseudomonas sp., strain AHD-1, from Tunisian soil.	Fendri I, Chaari A, Dhouib A, Jlassi B, Abousalham A, Carriere F, Sayadi S, Abdelkafi S	Environ Technol	10.1080/09593330903369994	2010
Enzymology	New enzymatic method of chiral amino acid synthesis by dynamic kinetic resolution of amino acid amides: use of stereoselective amino acid amidases in the presence of alpha-amino-epsilon-caprolactam racemase.	Yamaguchi S, Komeda H, Asano Y	Appl Environ Microbiol	10.1128/AEM.00807-07	2007
Metabolism	S-stereoselective piperazine-2-tert-butylcarboxamide hydrolase from Pseudomonas azotoformans IAM 1603 is a novel L-amino acid amidase.	Komeda H, Harada H, Washika S, Sakamoto T, Ueda M, Asano Y	Eur J Biochem	10.1111/j.1432-1033.2004.04056.x	2004
Genetics	Agronomic efficiency and genome mining analysis of the wheat-biostimulant rhizospheric bacterium Pseudomonas pergaminensis sp. nov. strain 1008^T.	Diaz M, Bach T, Gonzalez Anta G, Agaras B, Wibberg D, Noguera F, Canciani W, Valverde C.	Front Plant Sci	10.3389/fpls.2022.894985	2022
Phylogeny	Pseudomonas carnis sp. nov., isolated from meat.	Lick S, Krockel L, Wibberg D, Winkler A, Blom J, Bantleon A, Goesmann A, Kalinowski J	Int J Syst Evol Microbiol	10.1099/ijsem.0.003928	2020
Phylogeny	Pseudomonas lactis sp. nov. and Pseudomonas paralactis sp. nov., isolated from bovine raw milk.	von Neubeck M, Huptas C, Gluck C, Krewinkel M, Stoeckel M, Stressler T, Fischer L, Hinrichs J, Scherer S, Wenning M	Int J Syst Evol Microbiol	10.1099/ijsem.0.001836	2017

References

#7752	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18862
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#39570	; Curators of the CIP;
#45735	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 12536
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116693	Collection of Institut Pasteur ; Curators of the CIP; CIP 106744
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pseudomonas azotoformans (DSM 18862, IAM 1603, CCUG 12536)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

API 20NE

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900103345

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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