Name: Glutamicibacter endophyticus DSM 28750
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 131354

Type strain:

Species: Glutamicibacter endophyticus

Culture col. no.: DSM 28750, JCM 30091, KCTC 29490, EGI 6500322

Strain history: W.-J. Li EGI 6500322.

NCBI tax ID(s): 1522174 (species)

SI-ID 398201

DSM 28750

Special Collections

Section

When using BacDive for research please cite our paper

Glutamicibacter endophyticus DSM 28750 is a mesophilic bacterium that was isolated from surface-sterilized root of a healthy plant of the halophyte Salsola affinis C. A. Mey.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Micrococcaceae*
	Genus	*Glutamicibacter*
	Species	**Glutamicibacter endophyticus**
	Full Scientific Name (LPSN)	Glutamicibacter endophyticus (Wang et al. 2015) Busse and Schumann 2019

Synonym

Arthrobacter endophyticus

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22581]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #22581]

Culture medium growth

[Ref.: #22581]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22581]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22581]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-9

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22581]	Sample type/isolated from	surface-sterilized root of a healthy plant of the halophyte Salsola affinis C. A. Mey
[Ref.: #22581]	Host species	Salsola affinis
[Ref.: #22581]	Geographic location (country and/or sea, region)	Xinjiang province, Urumqi city
[Ref.: #22581]	Country	China
[Ref.: #22581]	Country ISO 3 Code	CHN
[Ref.: #22581]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Surface-sterilized root of a halophyte Salsola affinis from Urumqi
[Ref.: #67770]	Host species	Salsola affinis
[Ref.: #67770]	Geographic location (country and/or sea, region)	Xinjiang Province, north-west China
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Shrub (Scrub)
#Host Body-Site	#Plant	#Root (Rhizome)
#Host Body-Site	#Plant	#Sterilized plant part

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22581]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22581]	Glutamicibacter endophyticus strain EGI 6500322 16S ribosomal RNA gene, partial sequence	KM114214	1532	GenBank ENA	1522174 tax ID

[Ref.: #22581]	GC-content	62.0 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	62 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #22581]

Culture collection no.

DSM 28750, JCM 30091, KCTC 29490, EGI 6500322

[Ref.: #89794]

SI-ID 398201

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Arthrobacter endophyticus sp. nov., an endophytic actinobacterium isolated from root of Salsola affinis C. A. Mey.	Wang HF, Li L, Zhang YG, Hozzein WN, Zhou XK, Liu WH, Duan YQ, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.000235	2015	*
Phylogeny	Reclassification of Arthrobacter endophyticus (Wang et al. 2015) as Glutamicibacter endophyticus comb. nov.	Busse HJ, Schumann P	Int J Syst Evol Microbiol	10.1099/ijsem.0.003268	2019	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22581

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28750

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#89794

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398201.1 )

* These data were automatically processed and therefore are not curated

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