Name: Acidianus sp. RZ1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 131324

Type strain:

Species: Acidianus sp.

Strain Designation: RZ1

Culture col. no.: DSM 29099, JCM 30227

Strain history: W. Sand; Aquatic Biotechnol., Biofilm Centre, Univ. of Duisburg-Essen, Germany; RZ1.

NCBI tax ID(s): 1540082 (species)

SI-ID 408356

DSM 29099

Other strains from Acidianus sp.

A. sp. DSM 29038, ALE 1

Section

Acidianus sp. RZ1 is an anaerobe, spore-forming, thermophilic archaeon that was isolated from hot spring.

Gram-negative
spore-forming
anaerobe
thermophilic
16S sequence
Archaea
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Thermoproteota*
	Class	*Thermoprotei*
	Order	*Sulfolobales*
	Family	*Sulfolobaceae*
	Genus	*Acidianus*
	Full Scientific Name (LPSN)	Acidianus Segerer et al. 1986

Synonym

Desulfurolobus

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.818

[Ref.: #22551]

Incubation period

3-7 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22551]

Culture medium

SULFOLOBUS MEDIUM (DSMZ Medium 88)

[Ref.: #22551]

Culture medium growth

[Ref.: #22551]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22551]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22551]			growth	65 °C
[Ref.: #67770]			growth	65 °C

[Ref.: #22551]	Temperature range	thermophilic
[Ref.: #67770]	Temperature range	thermophilic
[Ref.: #69480]	Temperature range	thermophilic Confidence in %100

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

anaerobe Confidence in %98.499

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.918

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22551]	Sample type/isolated from	hot spring
[Ref.: #22551]	Geographic location (country and/or sea, region)	Caviahue-Copahue
[Ref.: #22551]	Country	Argentina
[Ref.: #22551]	Country ISO 3 Code	ARG
[Ref.: #22551]	Continent	Middle and South America
[Ref.: #22551]	Geographic location	-37.8182°/-71.0984°

[Ref.: #67770]	Sample type/isolated from	Hot spring in Caviahue-Copahue
[Ref.: #67770]	Country	Argentina
[Ref.: #67770]	Country ISO 3 Code	ARG
[Ref.: #67770]	Continent	Middle and South America
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Thermal spring
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22551]	Acidianus sp. RZ1 16S ribosomal RNA gene, partial sequence	KJ921703	934	ENA	1540082 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Acidianus sp. RZ1 DSM 29099	GCA_013133895	contig	GenBank	1540082 tax ID

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Acidianus sp. RZ1 DSM 29099 NCBI: GCA_013133895.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Acidianus sp. RZ1 DSM 29099 NCBI: GCA_013133895.1
[Ref.: #69480]	motile	no	82.876	no
[Ref.: #69480]	flagellated	no	97.235	no
[Ref.: #69480]	gram-positive	no	95.729	no
[Ref.: #69480]	anaerobic	yes	84.089	no
[Ref.: #69480]	aerobic	no	84.765	no
[Ref.: #69480]	halophile	no	79.967	no
[Ref.: #69480]	spore-forming	no	96.241	no
[Ref.: #69480]	glucose-util	yes	82.681	no
[Ref.: #69480]	thermophile	yes	100	no
[Ref.: #69480]	glucose-ferment	no	79.808	no

Availability in culture collections External links

[Ref.: #22551]

Culture collection no.

DSM 29099, JCM 30227

[Ref.: #89765]

SI-ID 408356

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Use of lectins to in situ visualize glycoconjugates of extracellular polymeric substances in acidophilic archaeal biofilms.	Zhang RY, Neu TR, Bellenberg S, Kuhlicke U, Sand W, Vera M	Microb Biotechnol	10.1111/1751-7915.12188	2014	*
Biotechnology	Biofilm dynamics and EPS production of a thermoacidophilic bioleaching archaeon.	Zhang R, Neu TR, Blanchard V, Vera M, Sand W	N Biotechnol	10.1016/j.nbt.2019.02.002	2019	*
	Insight Into Interactions of Thermoacidophilic Archaea With Elemental Sulfur: Biofilm Dynamics and EPS Analysis.	Zhang R, Neu TR, Li Q, Blanchard V, Zhang Y, Schippers A, Sand W	Front Microbiol	10.3389/fmicb.2019.00896	2019	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22551

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29099

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#89765

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID408356.1 )

* These data were automatically processed and therefore are not curated

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Acidianus sp. RZ1 DSM 29099

Acidianus sp. RZ1 DSM 29099

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