Paraburkholderia susongensis (DSM 100877, CCTCC AB 2014142, JCM 30231)

Name: Paraburkholderia susongensis (DSM 100877, CCTCC AB 2014142, JCM 30231)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 131317

Type strain

Strain Designation L226

Culture col. no. DSM 100877 CCTCC AB 2014142 JCM 30231 L226 LMG 29540

NCBI tax ID(s) 1515439

Special Collections DSMZ JCM

History DSMZ <- JCM <- X. Sheng, Key Laboratory of Agricultural Environment Microbiology; PR China; L226 JCM <-- X. F. Sheng; Nanjing Agric. Univ., China; L226.

Links

Paraburkholderia susongensis L226 is a bacterium that was isolated from weathered rock surface .

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 406031

LMG 29540,JCM 30231,DSM 100877

@ref 20215

Last LPSN update 2026-05-29 08:37:35

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Burkholderiaceae

Genus Paraburkholderia

Species Paraburkholderia susongensis

Full scientific name Paraburkholderia susongensis (Gu et al. 2015) Dobritsa and Samadpour 2016

Synonyms (1)

Burkholderia susongensis

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	94.244
125438	negative	97.994

Colony morphology

22544

Incubation period1-2 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
22544	R2A MEDIUM (DSMZ Medium 830)		Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
22544	positive	growth	30
67770	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	aerobe	90.15
125439	obligate aerobe	99.492

Spore formation

@ref	Spore formation	Confidence
125439		98.79

Enzymes

@ref	Value	Activity	Ec
22544	catalase	+	1.11.1.6

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Geologic

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
22544	weathered rock surface (mica schist)	Anhui Province, Susong	China	CHN	Asia
67770	Weathered surfaces of rock (mica schist) in Susong	Anhui Province	China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence KJ746438 (>99% sequence identity) for Paraburkholderia from Microbeatlas

Aquatic Samples	21
Soil Samples	323
Animal Samples	64
Plant Samples	0
Total Samples	408

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
22544	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	IMG-taxon 2708742529 annotated assembly for Paraburkholderia susongensis LMG 29540	scaffold	GCA_900177725	1515439.3	2708742529	1515439	71.83

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
22544	Paraburkholderia susongensis strain L226 16S ribosomal RNA gene, partial sequence	KJ746438	1453		1515439

GC content

22544

GC-content (mol%)63.5

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: IMG-taxon 2708742529 annotated assembly for Paraburkholderia susongensis LMG 29540
NCBI: GCA_900177725

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.49	no
125439	gram_stain	BacteriaNetⓘ	negative	94.24	no
125439	spore_formation	BacteriaNetⓘ	no	98.79	no
125439	motility	BacteriaNetⓘ	yes	59.36	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Paraburkholderia susongensis strain LMG 29540
PATRIC: 1515439.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.99	no
125438	anaerobic	anaerobicⓘ	no	97.45	no
125438	spore-forming	spore-formingⓘ	no	84.44	no
125438	aerobic	aerobicⓘ	yes	90.15	no
125438	thermophilic	thermophileⓘ	no	98.50	no
125438	flagellated	motile2+ⓘ	yes	86.67	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Burkholderia susongensis sp. nov., a mineral-weathering bacterium isolated from weathered rock surface.	Gu JY, Zang SG, Sheng XF, He LY, Huang Z, Wang Q	Int J Syst Evol Microbiol	10.1099/ijs.0.000059	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22544	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100877
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Paraburkholderia susongensis (DSM 100877, CCTCC AB 2014142, JCM 30231)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900177725

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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