Name: Sulfitobacter noctilucae NB-68
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 131302

Type strain:

Species: Sulfitobacter noctilucae

Strain Designation: NB-68

Culture col. no.: DSM 100978, JCM 18833, KCTC 32122

Strain history: J. F. Kim NB-68.

NCBI tax ID(s): 1342302 (species)

SI-ID 403750

DSM 100978

Section

Sulfitobacter noctilucae NB-68 is a mesophilic bacterium that was isolated from coastel water of sea sparkle bloom.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Roseobacteraceae*
	Genus	*Sulfitobacter*
	Species	**Sulfitobacter noctilucae**
	Full Scientific Name (LPSN)	Sulfitobacter noctilucae Kwak et al. 2014

Information on morphological and physiological properties Morphology

[Ref.: #22529]

Incubation period

1-2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22529]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #22529]

Culture medium growth

[Ref.: #22529]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22529]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22529]			growth	25 °C
[Ref.: #67770]			growth	30 °C

[Ref.: #22529]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #22529]		catalase	+	1.11.1.6
[Ref.: #22529]		cytochrome-c oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22529]	Sample type/isolated from	coastel water of sea sparkle bloom
[Ref.: #22529]	Geographic location (country and/or sea, region)	Geoje Island
[Ref.: #22529]	Country	Republic of Korea
[Ref.: #22529]	Country ISO 3 Code	KOR
[Ref.: #22529]	Continent	Asia
[Ref.: #22529]	Geographic location	34.8750°/128.6250°

[Ref.: #67770]	Sample type/isolated from	Seawater of a region of sea sparkle bloom in Geoje island
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Host	#Microbial	#Zooplankton

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KC428716 (>99% sequence identity) for Sulfitobacter noctilucae from Microbeatlas

Aquatic Samples	40
Soil Samples	6
Animal Samples
Plant Samples
Total Samples	46

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22529]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22529]	Sulfitobacter noctilucae strain NB-68 16S ribosomal RNA gene, partial sequence	KC428716	1409	ENA	1342302 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Sulfitobacter noctilucae NB-68	GCA_000622365	contig	GenBank	1342302 tax ID
[Ref.: #66792]	Sulfitobacter noctilucae NB-68	2579778790	draft	JGI IMG/M	1342302 tax ID	*

[Ref.: #22529]	GC-content	58.33 mol%
[Ref.: #67770]	GC-content	58.33 mol%	genome sequence analysis

Availability in culture collections External links

[Ref.: #22529]

Culture collection no.

DSM 100978, JCM 18833, KCTC 32122

[Ref.: #89744]

SI-ID 403750

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Sulfitobacter pacificus sp. nov., isolated from the red alga Pyropia yezoensis.	Fukui Y, Abe M, Kobayashi M, Satomi M	Antonie Van Leeuwenhoek	10.1007/s10482-015-0407-5	2015	*
Phylogeny	Sulfitobacter geojensis sp. nov., Sulfitobacter noctilucae sp. nov., and Sulfitobacter noctilucicola sp. nov., isolated from coastal seawater.	Kwak MJ, Lee JS, Lee KC, Kim KK, Eom MK, Kim BK, Kim JF	Int J Syst Evol Microbiol	10.1099/ijs.0.065961-0	2014	*
Phylogeny	Sulfitobacter alexandrii sp. nov., a new microalgae growth-promoting bacterium with exopolysaccharides bioflocculanting potential isolated from marine phycosphere.	Yang Q, Ge YM, Iqbal NM, Yang X, Zhang XL	Antonie Van Leeuwenhoek	10.1007/s10482-021-01580-0	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22529

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100978

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#89744

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403750.1 )

* These data were automatically processed and therefore are not curated

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