Name: Vibrio alfacsensis R707
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 131255

Type strain:

Species: Vibrio alfacsensis

Strain Designation: R707

Culture col. no.: DSM 24671, CAIM 1835

Strain history: <- B. Gomez-Gil, CAIM <- L. Chimetto, Universidade Federal do Rio de Janeiro, Brazil

NCBI tax ID(s): 1074311 (species)

SI-ID 405980

DSM 24671

Other strains from Vibrio alfacsensis

V. alfacsensis S277, DSM 24595, CAIM 1831 (type strain)

Section

Vibrio alfacsensis R707 is a mesophilic bacterium that was isolated from coral .

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	"Vibrionales"
	Family	*Vibrionaceae*
	Genus	*Vibrio*
	Species	**Vibrio alfacsensis**
	Full Scientific Name (LPSN)	Vibrio alfacsensis Gomez-Gil et al. 2012

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22482]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #22482]

Culture medium growth

[Ref.: #22482]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22482]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22482]			growth	25 °C

[Ref.: #22482]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22482]	Sample type/isolated from	coral (Mussismilia hispida)
[Ref.: #22482]	Host species	Mussismilia hispida
[Ref.: #22482]	Geographic location (country and/or sea, region)	Sao Paulo, Ilhabela, Praia Grande (23° 50' 59'' S, 45° 24' 59'' W)
[Ref.: #22482]	Country	Brazil
[Ref.: #22482]	Country ISO 3 Code	BRA
[Ref.: #22482]	Continent	Middle and South America
[Ref.: #22482]	Geographic location	-23.8497°/-45.4139°
* marker position based on {}

Isolation sources categories

#Host

#Invertebrates (Other)

#Cnidaria (Corals)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JF316660 (>99% sequence identity) for Vibrio from Microbeatlas

Aquatic Samples	202
Soil Samples	11
Animal Samples	148
Plant Samples	3
Total Samples	364

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22482]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22482]	Vibrio alfacsensis strain CAIM 1835 16S ribosomal RNA gene, partial sequence	JF316660	1426	ENA	1074311 tax ID

[Ref.: #22482]

GC-content

43.5 mol%

fluorimetric

Availability in culture collections External links

[Ref.: #22482]

Culture collection no.

DSM 24671, CAIM 1835

[Ref.: #89699]

SI-ID 405980

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Vibrio alfacsensis sp. nov., isolated from marine organisms.	Gomez-Gil B, Roque A, Chimetto L, Moreira APB, Lang E, Thompson FL	Int J Syst Evol Microbiol	10.1099/ijs.0.033191-0	2012	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22482

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24671

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#89699

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405980.1 )

* These data were automatically processed and therefore are not curated

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